ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1GCQ-16.PDB
Scoring matrix: BUD14_1GCQ-16_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 19.58
Foldx random average score for Saccharomyces cerevisiae: 17.517

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3207542
Proteins after random average filtering: 7179
 Total fragments: 1531309
Proteins after disorder filtering: 4655
 Total fragments: 94841
Proteins after pattern filtering: 2163
 Total fragments: 10559
Proteins after MINT filtering: 13
 Total fragments: 111


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

19.58

6.10

0.00

Best peptides

RRPWRSEQW

0.00

7.60

1.50

         
Interactors      
P13186

LPEREPPTY

14.13

4.46

-1.64

QEPLPEREP

14.20

-0.26

-6.36

RNSSIPMSP

14.36

0.52

-5.58

P27637

YQPLSPPRE

15.03

-3.73

-9.83

PLSPPRELD

16.24

-2.79

-8.89

NDDYQPLSP

17.20

-1.17

-7.27

Q12276

LPSRKPKRG

12.03

-3.40

-9.50

RRPSTTPSH

12.90

6.28

0.18

QLPSRKPKR

13.55

1.97

-4.13

P38853

TSNKPFDTP

16.20

0.34

-5.76

ATPVTPTSH

16.98

5.00

-1.10

VMDVPTDTP

17.35

-2.93

-9.03

P40095

IPVLPPPRS

12.62

-4.43

-10.53

LPPPRSPNR

13.68

1.40

-4.70

FPDSPSSSS

13.97

1.53

-4.57

P40036

LPTTPGIRS

11.57

0.32

-5.78

KIELPPLSP

14.42

-2.44

-8.54

SLPTTPGIR

15.56

-0.04

-6.14

P42073

RPPREPIEF

10.99

5.54

-0.56

LNKRPPREP

12.47

-3.78

-9.88

PPREPIEFD

15.34

1.04

-5.06

P53858

PRVKPDSQG

11.94

-0.47

-6.57

YLPEFEPNR

12.47

2.01

-4.09

LPEFEPNRP

12.91

-5.17

-11.27

Q03016

KPSRPSTSP

13.32

1.79

-4.31

HPPISSPSN

13.71

0.51

-5.59

IPLLTPINS

13.91

0.16

-5.94

Q07807

FMPPPPLSA

14.34

-1.36

-7.46

TPVFRPSNN

14.67

-1.76

-7.86

NSPFPFAYP

14.80

0.05

-6.05

P40187

PLNLPNNSA

12.49

-2.17

-8.27

EPLNLPNNS

15.45

1.42

-4.68

DEPLNLPNN

16.63

1.90

-4.20

P39960

IKFFDPTLP

15.16

-3.71

-9.81

FDPTLPASN

15.83

5.03

-1.07

MLINNPATP

15.98

-2.62

-8.72

P26570

DPTDSPNEW

11.65

6.74

0.64

TPSKPNLEV

14.63

0.88

-5.22

AYSTPLNSP

15.14

0.92

-5.18

 


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