ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1GCQ-12.PDB
Scoring matrix: BUD14_1GCQ-12_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 12.37
Foldx random average score for Saccharomyces cerevisiae: 8.945

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 1245580
Proteins after disorder filtering: 4478
 Total fragments: 62500
Proteins after pattern filtering: 2173
 Total fragments: 11299
Proteins after MINT filtering: 13
 Total fragments: 121


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

12.37

-1.67

0.00

Best peptides

RTIPRWWK

0.00

-5.16

-3.49

         
Interactors      
P13186

SSIPMSPN

4.95

-5.60

-3.93

NNIPLTPL

5.09

-5.09

-3.42

SYVPNRVP

5.73

-4.86

-3.19

P27637

YQPLSPPR

7.05

-3.99

-2.32

MSDPASKP

7.95

-3.10

-1.43

DYQPLSPP

8.05

-2.59

-0.92

Q12276

PQQLPSRK

6.42

-3.20

-1.53

PSRKPKRG

6.78

-3.85

-2.18

TRPKILPK

6.86

-3.95

-2.28

P38853

NKPFDTPT

7.20

-3.59

-1.92

MDVPTDTP

7.39

-5.34

-3.67

PYVPSESS

8.01

-4.89

-3.22

P40095

NRIPVLPP

4.69

-6.53

-4.86

VLPPPRSP

6.22

-3.85

-2.18

STFPDSPS

6.56

-3.74

-2.07

P40036

ELPPLSPK

6.99

-3.11

-1.44

PTTPGIRS

7.48

-4.90

-3.23

LPPLSPKS

8.02

-3.78

-2.11

P42073

NKRPPREP

6.74

-3.00

-1.33

KRPPREPI

7.50

-3.79

-2.12

RPPREPIE

8.92

-3.21

-1.54

P53858

PEFEPNRP

6.58

-4.13

-2.46

PSPPSSKL

6.68

-4.00

-2.33

EFEPNRPV

7.07

-2.90

-1.23

Q03016

NTKPSRPS

5.45

-3.47

-1.80

DNIPLLTP

5.46

-5.73

-4.06

PQQLPSRT

6.93

-3.86

-2.19

Q07807

MFMPPPPL

5.95

-5.60

-3.93

VFRPSNNP

6.13

-4.43

-2.76

NPIPVKMP

6.40

-6.27

-4.60

P40187

PSPPIYKK

6.32

-5.37

-3.70

PLNLPNNS

7.20

-4.57

-2.90

DEPLNLPN

7.23

-4.47

-2.80

P39960

PATPNQKM

8.17

-4.97

-3.30

FFDPTLPA

8.34

-3.37

-1.70

INNPATPN

8.48

-2.06

-0.39

P26570

STPLNSPG

7.47

-3.05

-1.38

PSKPNLEV

8.07

-3.05

-1.38

MEPKSPIL

8.38

-3.64

-1.97

 


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