ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1CKA-12.PDB
Scoring matrix: BUD14_1CKA-12_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 11.77
Foldx random average score for Saccharomyces cerevisiae: 10.070

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 1410005
Proteins after disorder filtering: 4665
 Total fragments: 94897
Proteins after pattern filtering: 2217
 Total fragments: 13591
Proteins after MINT filtering: 13
 Total fragments: 139


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

11.77

-0.92

0.00

Best peptides

WEWRRRRR

0.00

-3.01

-2.09

         
Interactors      
P13186

PSYVPNRV

6.61

-5.14

-4.22

NSSIPMSP

7.28

-3.96

-3.04

FKAPSYVP

7.79

-3.73

-2.81

P27637

PLSPPREL

7.38

-3.60

-2.68

YQPLSPPR

7.74

-3.67

-2.75

SDPASKPN

8.14

-2.80

-1.88

Q12276

LPSRKPKR

6.31

-2.53

-1.61

PSRKPKRG

6.45

-4.37

-3.45

TRPKILPK

6.70

-4.41

-3.49

P38853

NKPFDTPT

8.20

-3.44

-2.52

ASAPSPAP

8.56

-2.64

-1.72

APSPAPKD

9.17

-2.40

-1.48

P40095

VLPPPRSP

6.25

-5.73

-4.81

PPPRSPNR

6.65

-2.92

-2.00

PRSPNRPT

6.66

-2.14

-1.22

P40036

LPPLSPKS

8.79

-3.37

-2.45

ELPPLSPK

9.18

-2.87

-1.95

P42073

RPPREPIE

6.63

-4.49

-3.57

NKRPPREP

7.07

-3.02

-2.10

KRPPREPI

7.34

-3.95

-3.03

P53858

STPRVKPD

5.19

-3.78

-2.86

PEFEPNRP

5.93

-4.42

-3.50

EFEPNRPV

7.24

-2.81

-1.89

Q03016

NTKPSRPS

6.18

-3.36

-2.44

LFSPANPK

6.43

-3.13

-2.21

ANPKILPK

6.82

-4.37

-3.45

Q07807

PFAYPNPM

5.96

-3.95

-3.03

PSSPPNNS

6.35

-2.99

-2.07

YYPTPNPI

6.48

-3.39

-2.47

P40187

PSPPIYKK

6.74

-4.23

-3.31

DEPLNLPN

6.98

-4.26

-3.34

MDEPLNLP

7.57

-3.26

-2.34

P39960

NPATPNQK

7.90

-2.46

-1.54

FFDPTLPA

8.55

-3.04

-2.12

FDPTLPAS

9.75

-2.14

-1.22

P26570

PKSPILKT

7.28

-3.34

-2.42

TPSKPNLE

7.62

-2.86

-1.94

MEPKSPIL

7.80

-4.08

-3.16

 


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