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Matrix information:
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ADAN-name: BEM1-D2_1SEM-9.PDB
Scoring matrix: BEM1-D2_1SEM-9_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 15.69
Foldx random average score for Saccharomyces cerevisiae: 12.417 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3214721
Proteins after random average filtering: 7179
Total fragments: 1459314
Proteins after disorder filtering: 4534
Total fragments: 69013
Proteins after pattern filtering: 2224
Total fragments: 13430
Proteins after MINT filtering: 10
Total fragments: 97
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
15.69
|
-1.76 |
0.00 |
| Best peptides |
YPPRPPFD |
0.00
|
-10.98 |
-9.22 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
FKLVPPQP |
7.24
|
-8.71 |
-6.95 |
|
RAPKPPSY |
7.25
|
-6.52 |
-4.76 |
|
SPGRAPKP |
8.30
|
-8.51 |
-6.75 |
| P29366 |
KRIMPYIP |
7.43
|
-8.90 |
-7.14 |
|
MPYIPGPV |
7.64
|
-8.30 |
-6.54 |
|
YIPGPVPY |
9.19
|
-6.69 |
-4.93 |
| P21268 |
KPISPPPS |
9.60
|
-7.34 |
-5.58 |
|
SKPISPPP |
10.20
|
-6.52 |
-4.76 |
|
NLSKPISP |
10.27
|
-6.39 |
-4.63 |
| P11433 |
PSATPNME |
11.08
|
-5.96 |
-4.20 |
| P50090 |
RIVTPTLP |
7.93
|
-10.23 |
-8.47 |
|
TPTLPPNQ |
10.43
|
-7.84 |
-6.08 |
|
LPWSPESK |
10.59
|
-5.94 |
-4.18 |
| P32618 |
NPVISPYS |
8.52
|
-7.05 |
-5.29 |
|
TNPMHPQS |
9.38
|
-4.65 |
-2.89 |
|
GPKVPAKE |
9.56
|
-7.41 |
-5.65 |
| Q03497 |
IPSRPAPK |
6.05
|
-8.92 |
-7.16 |
|
LPPIPPTK |
7.02
|
-8.78 |
-7.02 |
|
FPSKNPLK |
8.00
|
-7.18 |
-5.42 |
| P39969 |
FKLLPPQP |
7.03
|
-9.59 |
-7.83 |
|
RAPKPPSY |
7.25
|
-6.52 |
-4.76 |
|
SPRRAPKP |
7.91
|
-8.21 |
-6.45 |
| P22224 |
FPSTPGTI |
8.21
|
-7.36 |
-5.60 |
|
TPSTPTFP |
9.19
|
-7.88 |
-6.12 |
|
YQSPMTPS |
10.70
|
-5.50 |
-3.74 |
| P35735 |
PLASPHFN |
11.37
|
-6.22 |
-4.46 |
|
LASPHFNP |
12.29
|
-4.31 |
-2.55 |
|
SPHFNPQS |
12.40
|
-4.62 |
-2.86 |
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