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Matrix information:
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ADAN-name: BEM1-D2_1SEM-26.PDB
Scoring matrix: BEM1-D2_1SEM-26_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 17.15
Foldx random average score for Saccharomyces cerevisiae: 13.043 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1286421
Proteins after disorder filtering: 4339
Total fragments: 65470
Proteins after pattern filtering: 2189
Total fragments: 15064
Proteins after MINT filtering: 10
Total fragments: 120
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
17.15
|
-1.89 |
0.00 |
| Best peptides |
SERPRMFRR |
0.00
|
-7.20 |
-5.31 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
PQSPSFNNR |
8.27
|
-5.95 |
-4.06 |
|
GRAPKPPSY |
9.05
|
-6.13 |
-4.24 |
|
FESPGRAPK |
9.17
|
-5.76 |
-3.87 |
| P29366 |
RIMPYIPGP |
9.30
|
-7.70 |
-5.81 |
|
PYIPGPVPY |
10.83
|
-4.34 |
-2.45 |
|
KRIMPYIPG |
11.50
|
-4.53 |
-2.64 |
| P21268 |
SKPISPPPS |
9.19
|
-5.78 |
-3.89 |
|
KPISPPPSL |
10.73
|
-4.76 |
-2.87 |
|
PISPPPSLK |
11.39
|
-2.78 |
-0.89 |
| P11433 |
SNPSATPNM |
10.93
|
-6.25 |
-4.36 |
| P50090 |
PTLPPNQHR |
9.57
|
-6.41 |
-4.52 |
|
ALPWSPESK |
9.96
|
-0.60 |
1.29 |
|
VTPTLPPNQ |
11.72
|
-5.02 |
-3.13 |
| P32618 |
PSPKPSHKR |
6.48
|
-6.00 |
-4.11 |
|
KEPSPKPSH |
8.76
|
-6.10 |
-4.21 |
|
NDVPIVPGN |
8.94
|
-7.29 |
-5.40 |
| Q03497 |
HKPKVKPSK |
5.85
|
-6.20 |
-4.31 |
|
THAPTTPNR |
6.70
|
-7.37 |
-5.48 |
|
PLPPIPPTK |
7.18
|
-6.54 |
-4.65 |
| P39969 |
LSPIPSPTR |
6.01
|
-7.71 |
-5.82 |
|
RRAPKPPSY |
8.27
|
-6.35 |
-4.46 |
|
YPSPAQPPK |
8.68
|
-5.66 |
-3.77 |
| P22224 |
STPTFPNAN |
10.65
|
-3.66 |
-1.77 |
|
TPSTPTFPN |
10.76
|
-4.96 |
-3.07 |
|
PMTPSTPTF |
11.94
|
-6.72 |
-4.83 |
| P35735 |
PLASPHFNP |
12.27
|
-4.37 |
-2.48 |
|
LASPHFNPQ |
12.49
|
-2.56 |
-0.67 |
|
ASPHFNPQS |
12.88
|
-3.92 |
-2.03 |
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