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Matrix information:
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ADAN-name: BEM1-D2_1SEM-19.PDB
Scoring matrix: BEM1-D2_1SEM-19_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 17.0
Foldx random average score for Saccharomyces cerevisiae: 16.616 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1537201
Proteins after disorder filtering: 4602
Total fragments: 78109
Proteins after pattern filtering: 2153
Total fragments: 10015
Proteins after MINT filtering: 9
Total fragments: 80
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
17.00
|
-0.80 |
0.00 |
| Best peptides |
IPSRFGWSF |
0.00
|
-3.19 |
-2.39 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
VPPQPGSKK |
11.63
|
-4.49 |
-3.69 |
|
IFESPGRAP |
12.45
|
-6.30 |
-5.50 |
|
PPQPGSKKG |
12.67
|
-5.95 |
-5.15 |
| P29366 |
KRIMPYIPG |
13.18
|
-7.28 |
-6.48 |
|
MPYIPGPVP |
14.61
|
-5.35 |
-4.55 |
|
RIMPYIPGP |
16.19
|
-6.91 |
-6.11 |
| P21268 |
LSKPISPPP |
15.47
|
-7.55 |
-6.75 |
|
NLSKPISPP |
16.44
|
-6.51 |
-5.71 |
| P50090 |
LPWSPESKN |
15.18
|
-4.13 |
-3.33 |
|
PTLPPNQHR |
15.80
|
-6.78 |
-5.98 |
|
IVTPTLPPN |
15.94
|
-5.37 |
-4.57 |
| P32618 |
VPIVPGNNT |
12.51
|
-4.34 |
-3.54 |
|
PNLSPRLSN |
14.83
|
-2.04 |
-1.24 |
|
PSPKPSHKR |
15.01
|
-4.87 |
-4.07 |
| Q03497 |
IPSRPAPKP |
8.56
|
-8.58 |
-7.78 |
|
PPIPPTKSK |
11.47
|
-7.25 |
-6.45 |
|
KPSKPEAKS |
11.78
|
-5.46 |
-4.66 |
| P39969 |
LPPQPGSKK |
11.56
|
-5.22 |
-4.42 |
|
PPQPGSKKG |
12.67
|
-5.95 |
-5.15 |
|
VSPRRAPKP |
12.68
|
-7.23 |
-6.43 |
| P22224 |
FPSTPGTID |
13.71
|
-3.68 |
-2.88 |
|
YQSPMTPST |
14.07
|
-3.83 |
-3.03 |
|
PMTPSTPTF |
14.58
|
-5.02 |
-4.22 |
| P35735 |
ASPHFNPQS |
15.56
|
-5.31 |
-4.51 |
|
PHFNPQSSE |
15.58
|
-1.96 |
-1.16 |
|
PLASPHFNP |
16.13
|
-5.84 |
-5.04 |
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