Matrix information:
(Help) ADAN-name: BEM1-D2_1SEM-14.PDB Scoring matrix: BEM1-D2_1SEM-14_mat Uniprot code: P29366 Genome source: Saccharomyces cerevisiae Wild-type ligand: AAAAAAAAA Foldx wt ligand score: 17.5 Foldx random average score for Saccharomyces cerevisiae: 12.307 Available information for P29366 in MINT (Nov 2008): Nš of interacting proteins: 16 Proteins belonging to other specie: 1 Nš of interactions described: 42 Interactions with other species: 2
Genome scanning information:
Subcellular location: False Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0 Proteins considered as fragments or having non-standard amino acids: 230 Total scanned proteins: 7179 Total fragments: 3207542 Proteins after random average filtering: 7179 Total fragments: 1709237 Proteins after disorder filtering: 4294 Total fragments: 54700 Proteins after pattern filtering: 1881 Total fragments: 6807 Proteins after MINT filtering: 8 Total fragments: 50
Prediction of know targets:
Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
Reference wt |
AAAAAAAAA |
17.50
|
-2.40 |
0.00 |
Best peptides |
WMFIILKMI |
0.00
|
-6.13 |
-3.73 |
|
|
|
|
|
Interactors |
|
|
|
|
P38041 |
PQSPSFNNR |
10.00
|
-6.03 |
-3.63 |
|
QPPQSPSFN |
11.20
|
-4.31 |
-1.91 |
|
PPSYPSPVQ |
12.00
|
-3.90 |
-1.50 |
P29366 |
KRIMPYIPG |
9.19
|
-6.61 |
-4.21 |
|
IMPYIPGPV |
10.48
|
-5.62 |
-3.22 |
|
IPGPVPYVT |
12.30
|
-5.36 |
-2.96 |
P21268 |
SKPISPPPS |
11.41
|
-5.40 |
-3.00 |
|
KPISPPPSL |
11.71
|
-6.35 |
-3.95 |
P50090 |
TPTLPPNQH |
11.70
|
-5.86 |
-3.46 |
|
PTLPPNQHR |
11.80
|
-5.51 |
-3.11 |
|
ALPWSPESK |
11.84
|
-4.04 |
-1.64 |
P32618 |
PSPKPSHKR |
8.69
|
-6.54 |
-4.14 |
|
TPSTSPSGR |
9.98
|
-4.50 |
-2.10 |
|
VPAKEPSPK |
10.10
|
-5.34 |
-2.94 |
Q03497 |
HKPKVKPSK |
7.55
|
-5.01 |
-2.61 |
|
LPPIPPTKS |
9.05
|
-6.64 |
-4.24 |
|
FPSKNPLKN |
9.82
|
-6.65 |
-4.25 |
P39969 |
LSPIPSPTR |
8.09
|
-6.38 |
-3.98 |
|
QPPKSPLLN |
10.24
|
-5.26 |
-2.86 |
|
PEENPITSM |
10.35
|
-6.82 |
-4.42 |
P22224 |
IFPSTPGTI |
9.93
|
-4.80 |
-2.40 |
|
TPTFPNANG |
11.94
|
-5.41 |
-3.01 |
|