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Matrix information:
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ADAN-name: BEM1-D2_1SEM-14.PDB
Scoring matrix: BEM1-D2_1SEM-14_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 17.5
Foldx random average score for Saccharomyces cerevisiae: 12.307 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1709237
Proteins after disorder filtering: 4294
Total fragments: 54700
Proteins after pattern filtering: 1881
Total fragments: 6807
Proteins after MINT filtering: 8
Total fragments: 50
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
17.50
|
-2.40 |
0.00 |
| Best peptides |
WMFIILKMI |
0.00
|
-6.13 |
-3.73 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
PQSPSFNNR |
10.00
|
-6.03 |
-3.63 |
|
QPPQSPSFN |
11.20
|
-4.31 |
-1.91 |
|
PPSYPSPVQ |
12.00
|
-3.90 |
-1.50 |
| P29366 |
KRIMPYIPG |
9.19
|
-6.61 |
-4.21 |
|
IMPYIPGPV |
10.48
|
-5.62 |
-3.22 |
|
IPGPVPYVT |
12.30
|
-5.36 |
-2.96 |
| P21268 |
SKPISPPPS |
11.41
|
-5.40 |
-3.00 |
|
KPISPPPSL |
11.71
|
-6.35 |
-3.95 |
| P50090 |
TPTLPPNQH |
11.70
|
-5.86 |
-3.46 |
|
PTLPPNQHR |
11.80
|
-5.51 |
-3.11 |
|
ALPWSPESK |
11.84
|
-4.04 |
-1.64 |
| P32618 |
PSPKPSHKR |
8.69
|
-6.54 |
-4.14 |
|
TPSTSPSGR |
9.98
|
-4.50 |
-2.10 |
|
VPAKEPSPK |
10.10
|
-5.34 |
-2.94 |
| Q03497 |
HKPKVKPSK |
7.55
|
-5.01 |
-2.61 |
|
LPPIPPTKS |
9.05
|
-6.64 |
-4.24 |
|
FPSKNPLKN |
9.82
|
-6.65 |
-4.25 |
| P39969 |
LSPIPSPTR |
8.09
|
-6.38 |
-3.98 |
|
QPPKSPLLN |
10.24
|
-5.26 |
-2.86 |
|
PEENPITSM |
10.35
|
-6.82 |
-4.42 |
| P22224 |
IFPSTPGTI |
9.93
|
-4.80 |
-2.40 |
|
TPTFPNANG |
11.94
|
-5.41 |
-3.01 |
|
