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Matrix information:
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ADAN-name: BEM1-D2_1SEM-11.PDB
Scoring matrix: BEM1-D2_1SEM-11_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 18.63
Foldx random average score for Saccharomyces cerevisiae: 15.599 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3221900
Proteins after random average filtering: 7179
Total fragments: 1377645
Proteins after disorder filtering: 4703
Total fragments: 85569
Proteins after pattern filtering: 2186
Total fragments: 10589
Proteins after MINT filtering: 10
Total fragments: 77
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAA |
18.63
|
1.88 |
0.00 |
| Best peptides |
YRPRHRM |
0.00
|
-2.50 |
-4.38 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
RAPKPPS |
10.52
|
-4.57 |
-6.45 |
|
SPGRAPK |
10.73
|
-5.36 |
-7.24 |
|
SPVQPPQ |
11.58
|
-4.13 |
-6.01 |
| P29366 |
MPYIPGP |
9.10
|
-6.00 |
-7.88 |
|
PGPVPYV |
12.58
|
-3.36 |
-5.24 |
|
YIPGPVP |
13.55
|
-4.40 |
-6.28 |
| P21268 |
KPISPPP |
13.20
|
-4.71 |
-6.59 |
|
SKPISPP |
13.27
|
-2.69 |
-4.57 |
|
PISPPPS |
15.48
|
-4.00 |
-5.88 |
| P11433 |
PSATPNM |
12.55
|
-3.26 |
-5.14 |
|
NPSATPN |
13.13
|
-0.82 |
-2.70 |
| P50090 |
TPTLPPN |
8.78
|
-4.96 |
-6.84 |
|
PTLPPNQ |
15.09
|
-2.51 |
-4.39 |
| P32618 |
VPIVPGN |
7.89
|
-6.25 |
-8.13 |
|
TNPMHPQ |
7.91
|
-1.13 |
-3.01 |
|
PNLSPRL |
11.40
|
-2.50 |
-4.38 |
| Q03497 |
IPSRPAP |
8.40
|
-5.12 |
-7.00 |
|
FPSKNPL |
8.84
|
-4.51 |
-6.39 |
|
EQPLPPI |
10.07
|
-4.82 |
-6.70 |
| P39969 |
SPRRAPK |
10.36
|
-4.63 |
-6.51 |
|
RAPKPPS |
10.52
|
-4.57 |
-6.45 |
|
QPPKSPL |
10.54
|
-3.30 |
-5.18 |
| P22224 |
STPTFPN |
13.60
|
-1.48 |
-3.36 |
|
TPTFPNA |
13.84
|
-4.04 |
-5.92 |
|
FPSTPGT |
13.99
|
-4.06 |
-5.94 |
| P35735 |
SPHFNPQ |
10.44
|
-3.15 |
-5.03 |
|
PHFNPQS |
15.18
|
-2.34 |
-4.22 |
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