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Matrix information:
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ADAN-name: BEM1-D2_1GCQ-7.PDB
Scoring matrix: BEM1-D2_1GCQ-7_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAA
Foldx wt ligand score: 13.74
Foldx random average score for Saccharomyces cerevisiae: 11.744 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3214721
Proteins after random average filtering: 7179
Total fragments: 1344621
Proteins after disorder filtering: 4428
Total fragments: 57703
Proteins after pattern filtering: 1987
Total fragments: 8324
Proteins after MINT filtering: 10
Total fragments: 74
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AGAAAAAA |
13.74
|
1.39 |
0.00 |
| Best peptides |
WRRRRPWE |
0.00
|
0.22 |
-1.17 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
RAPKPPSY |
10.16
|
-3.62 |
-5.01 |
|
PKPPSYPS |
10.39
|
-0.72 |
-2.11 |
|
PSPVQPPQ |
10.46
|
-1.92 |
-3.31 |
| P29366 |
KRIMPYIP |
9.56
|
-6.01 |
-7.40 |
|
MPYIPGPV |
11.20
|
-4.27 |
-5.66 |
|
RIMPYIPG |
11.40
|
-3.16 |
-4.55 |
| P21268 |
SKPISPPP |
10.69
|
-1.93 |
-3.32 |
| P11433 |
PSATPNME |
11.17
|
-5.86 |
-7.25 |
| P50090 |
PWSPESKN |
10.13
|
-2.65 |
-4.04 |
|
VTPTLPPN |
10.24
|
-4.30 |
-5.69 |
|
ALPWSPES |
10.65
|
-0.25 |
-1.64 |
| P32618 |
KSEPAPLP |
9.46
|
-3.79 |
-5.18 |
|
NPVISPYS |
9.62
|
-4.25 |
-5.64 |
|
VPNLSPRL |
9.81
|
-4.08 |
-5.47 |
| Q03497 |
FPSKNPLK |
7.58
|
-4.42 |
-5.81 |
|
KVKPSKPE |
9.06
|
-1.46 |
-2.85 |
|
KPKVKPSK |
9.14
|
-2.99 |
-4.38 |
| P39969 |
QPPKSPLL |
6.71
|
-3.53 |
-4.92 |
|
VSPRRAPK |
8.04
|
-3.95 |
-5.34 |
|
RRAPKPPS |
8.74
|
-1.57 |
-2.96 |
| P22224 |
YQSPMTPS |
10.82
|
-2.00 |
-3.39 |
|
PMTPSTPT |
11.72
|
-1.31 |
-2.70 |
| P35735 |
ASPHFNPQ |
10.65
|
-2.93 |
-4.32 |
|
PLASPHFN |
10.80
|
-4.79 |
-6.18 |
|
