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Matrix information:
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ADAN-name: BEM1-D2_1GCQ-5.PDB
Scoring matrix: BEM1-D2_1GCQ-5_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 19.62
Foldx random average score for Saccharomyces cerevisiae: 19.506 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3200363
Proteins after random average filtering: 7179
Total fragments: 1538951
Proteins after disorder filtering: 4475
Total fragments: 92415
Proteins after pattern filtering: 2292
Total fragments: 19990
Proteins after MINT filtering: 10
Total fragments: 142
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAAA |
19.62
|
-0.63 |
0.00 |
| Best peptides |
IKWRRFWPHW |
0.00
|
6.24 |
6.87 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
SKSQSNPTSP |
12.04
|
-6.19 |
-5.56 |
|
FKLVPPQPGS |
12.20
|
-4.65 |
-4.02 |
|
GRAPKPPSYP |
12.44
|
-7.05 |
-6.42 |
| P29366 |
IMPYIPGPVP |
11.46
|
-5.21 |
-4.58 |
|
KRIMPYIPGP |
12.30
|
-7.23 |
-6.60 |
|
MPYIPGPVPY |
17.51
|
0.32 |
0.95 |
| P21268 |
SKPISPPPSL |
10.03
|
-6.25 |
-5.62 |
|
LNLSKPISPP |
11.77
|
-5.60 |
-4.97 |
|
PLNLSKPISP |
13.24
|
-7.17 |
-6.54 |
| P11433 |
YTNSNPSATP |
12.96
|
-5.82 |
-5.19 |
| P50090 |
ALPWSPESKN |
10.63
|
-8.75 |
-8.12 |
|
VTPTLPPNQH |
13.05
|
-7.67 |
-7.04 |
|
TPTLPPNQHR |
15.04
|
-0.66 |
-0.03 |
| P32618 |
AKEPSPKPSH |
11.64
|
-7.82 |
-7.19 |
|
ATNTNPMHPQ |
12.01
|
-7.10 |
-6.47 |
|
PVSYSPSNEP |
12.78
|
-5.86 |
-5.23 |
| Q03497 |
HKQHKPKVKP |
7.07
|
-8.56 |
-7.93 |
|
FIPSRPAPKP |
9.80
|
-7.93 |
-7.30 |
|
EQPLPPIPPT |
10.57
|
-4.99 |
-4.36 |
| P39969 |
VSPRRAPKPP |
9.29
|
-9.74 |
-9.11 |
|
GKALSPIPSP |
9.54
|
-8.23 |
-7.60 |
|
RRAPKPPSYP |
11.10
|
-7.86 |
-7.23 |
| P22224 |
SNGYQSPMTP |
15.24
|
-2.78 |
-2.15 |
|
QSPMTPSTPT |
15.26
|
-5.77 |
-5.14 |
|
NGYQSPMTPS |
15.34
|
-3.71 |
-3.08 |
| P35735 |
SPHFNPQSSE |
14.36
|
-3.70 |
-3.07 |
|
PLASPHFNPQ |
14.95
|
-4.65 |
-4.02 |
|
ASPHFNPQSS |
18.04
|
-2.89 |
-2.26 |
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