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Matrix information:
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ADAN-name: BEM1-D2_1GCQ-28.PDB
Scoring matrix: BEM1-D2_1GCQ-28_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 23.04
Foldx random average score for Saccharomyces cerevisiae: 19.914 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3200363
Proteins after random average filtering: 7179
Total fragments: 1471685
Proteins after disorder filtering: 4240
Total fragments: 55090
Proteins after pattern filtering: 2036
Total fragments: 9956
Proteins after MINT filtering: 9
Total fragments: 69
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAAA |
23.04
|
1.47 |
0.00 |
| Best peptides |
RRRFFPWRIR |
0.00
|
-6.91 |
-8.38 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
PPQSPSFNNR |
12.45
|
-10.33 |
-11.80 |
|
KLVPPQPGSK |
15.61
|
-9.03 |
-10.50 |
|
LVPPQPGSKK |
16.15
|
-8.62 |
-10.09 |
| P29366 |
YIPGPVPYVT |
15.98
|
-8.59 |
-10.06 |
| P21268 |
KPISPPPSLK |
13.15
|
-9.10 |
-10.57 |
|
PISPPPSLKK |
15.04
|
-9.37 |
-10.84 |
| P50090 |
TPTLPPNQHR |
12.69
|
-11.96 |
-13.43 |
|
TALPWSPESK |
17.43
|
-4.91 |
-6.38 |
|
RIVTPTLPPN |
19.00
|
-8.76 |
-10.23 |
| P32618 |
EPSPKPSHKR |
12.49
|
-10.91 |
-12.38 |
|
TPSTSPSGRR |
14.93
|
-8.29 |
-9.76 |
|
VPIVPGNNTT |
15.52
|
-9.52 |
-10.99 |
| Q03497 |
KPSKPEAKSK |
13.39
|
-9.32 |
-10.79 |
|
LPPIPPTKSK |
13.54
|
-9.04 |
-10.51 |
|
PPIPPTKSKT |
13.61
|
-9.55 |
-11.02 |
| P39969 |
PKSPLLNNTR |
13.20
|
-10.05 |
-11.52 |
|
ALSPIPSPTR |
13.87
|
-10.61 |
-12.08 |
|
KLLPPQPGSK |
15.54
|
-8.87 |
-10.34 |
| P22224 |
STPTFPNANG |
16.61
|
-6.35 |
-7.82 |
|
TPSTPTFPNA |
16.87
|
-9.21 |
-10.68 |
|
SPMTPSTPTF |
17.89
|
-8.42 |
-9.89 |
| P35735 |
PHFNPQSSEK |
17.58
|
-7.17 |
-8.64 |
|
LASPHFNPQS |
18.49
|
-6.41 |
-7.88 |
|
SPHFNPQSSE |
18.85
|
-3.79 |
-5.26 |
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