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Matrix information:
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ADAN-name: BEM1-D2_1GCQ-25.PDB
Scoring matrix: BEM1-D2_1GCQ-25_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 17.9
Foldx random average score for Saccharomyces cerevisiae: 15.571 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1703916
Proteins after disorder filtering: 4613
Total fragments: 114557
Proteins after pattern filtering: 2303
Total fragments: 20157
Proteins after MINT filtering: 10
Total fragments: 141
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
17.90
|
3.67 |
0.00 |
| Best peptides |
KYPPIGGRP |
0.00
|
-3.37 |
-7.04 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
VPPQPGSKK |
8.18
|
-3.78 |
-7.45 |
|
CFKLVPPQP |
8.23
|
-4.65 |
-8.32 |
|
IFESPGRAP |
8.34
|
-2.72 |
-6.39 |
| P29366 |
IMPYIPGPV |
8.29
|
-4.03 |
-7.70 |
|
MPYIPGPVP |
9.98
|
-1.10 |
-4.77 |
|
PYIPGPVPY |
10.86
|
-3.22 |
-6.89 |
| P21268 |
LSKPISPPP |
10.40
|
-2.06 |
-5.73 |
|
PISPPPSLK |
10.95
|
-2.62 |
-6.29 |
|
LNLSKPISP |
11.60
|
-2.73 |
-6.40 |
| P11433 |
NPSATPNME |
13.98
|
-2.84 |
-6.51 |
| P50090 |
VTPTLPPNQ |
11.78
|
-6.61 |
-10.28 |
|
ALPWSPESK |
11.84
|
-2.74 |
-6.41 |
|
ASTALPWSP |
12.08
|
-2.74 |
-6.41 |
| P32618 |
EPAPLPSHY |
9.89
|
-4.38 |
-8.05 |
|
EPSPKPSHK |
10.02
|
-3.37 |
-7.04 |
|
SKSEPAPLP |
11.40
|
-2.16 |
-5.83 |
| Q03497 |
SFPSKNPLK |
7.69
|
-4.66 |
-8.33 |
|
NGKFIPSRP |
7.79
|
-5.40 |
-9.07 |
|
KPKVKPSKP |
8.15
|
-2.26 |
-5.93 |
| P39969 |
CFKLLPPQP |
7.33
|
-7.01 |
-10.68 |
|
LPPQPGSKK |
8.05
|
-3.16 |
-6.83 |
|
LLPPQPGSK |
9.38
|
-3.43 |
-7.10 |
| P22224 |
MTPSTPTFP |
10.59
|
-4.91 |
-8.58 |
|
STPTFPNAN |
11.85
|
-0.93 |
-4.60 |
|
FPSTPGTID |
12.50
|
-0.67 |
-4.34 |
| P35735 |
ASPHFNPQS |
13.15
|
0.00 |
-3.67 |
|
LASPHFNPQ |
13.93
|
1.70 |
-1.97 |
|
PLASPHFNP |
13.95
|
0.50 |
-3.17 |
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