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Matrix information:
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ADAN-name: BEM1-D2_1GCQ-21.PDB
Scoring matrix: BEM1-D2_1GCQ-21_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAGGAAAA
Foldx wt ligand score: 18.16
Foldx random average score for Saccharomyces cerevisiae: 17.572 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3200363
Proteins after random average filtering: 7179
Total fragments: 1862348
Proteins after disorder filtering: 4452
Total fragments: 82571
Proteins after pattern filtering: 1696
Total fragments: 4386
Proteins after MINT filtering: 7
Total fragments: 34
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAGGAAAA |
18.16
|
-2.17 |
0.00 |
| Best peptides |
EWKLHRPTMK |
0.00
|
-1.77 |
0.40 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
QSNPTSPTKQ |
12.16
|
-5.15 |
-2.98 |
|
PTSPTKQTFT |
12.99
|
-5.08 |
-2.91 |
|
PQSPSFNNRY |
14.38
|
-7.48 |
-5.31 |
| P11433 |
SNPSATPNME |
15.25
|
-6.84 |
-4.67 |
| P50090 |
ALPWSPESKN |
16.09
|
-4.13 |
-1.96 |
|
VTPTLPPNQH |
16.68
|
-6.30 |
-4.13 |
| P32618 |
EPSPKPSHKR |
12.02
|
-6.95 |
-4.78 |
|
PIVPGNNTTL |
12.66
|
-4.82 |
-2.65 |
|
NDVPIVPGNN |
15.36
|
-3.53 |
-1.36 |
| Q03497 |
THAPTTPNRT |
12.69
|
-6.53 |
-4.36 |
|
TGLPGSPQVS |
14.10
|
-3.08 |
-0.91 |
|
PLPPIPPTKS |
15.40
|
-4.12 |
-1.95 |
| P39969 |
PKSPLLNNTR |
12.34
|
-6.33 |
-4.16 |
|
LLPPQPGSKK |
15.01
|
-4.72 |
-2.55 |
|
PPQPGSKKGL |
15.58
|
-5.60 |
-3.43 |
| P22224 |
PSTPTFPNAN |
14.22
|
-3.69 |
-1.52 |
|
IFPSTPGTID |
16.61
|
-2.78 |
-0.61 |
|
PTFPNANGVD |
17.06
|
-3.29 |
-1.12 |
|
