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Matrix information:
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ADAN-name: BEM1-D2_1GCQ-18.PDB
Scoring matrix: BEM1-D2_1GCQ-18_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAAA
Foldx wt ligand score: 20.24
Foldx random average score for Saccharomyces cerevisiae: 18.974 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3200363
Proteins after random average filtering: 7179
Total fragments: 1452110
Proteins after disorder filtering: 4481
Total fragments: 79759
Proteins after pattern filtering: 2033
Total fragments: 9225
Proteins after MINT filtering: 9
Total fragments: 71
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAAA |
20.24
|
0.13 |
0.00 |
| Best peptides |
FPPLNSRRWY |
0.00
|
-0.46 |
-0.59 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
PPQSPSFNNR |
13.73
|
-1.98 |
-2.11 |
|
IFESPGRAPK |
15.69
|
-2.22 |
-2.35 |
|
PPQPGSKKGL |
16.29
|
-3.12 |
-3.25 |
| P29366 |
MPYIPGPVPY |
11.36
|
-4.25 |
-4.38 |
|
KRIMPYIPGP |
17.06
|
-5.64 |
-5.77 |
| P11433 |
TNSNPSATPN |
18.73
|
-0.74 |
-0.87 |
| P50090 |
TPTLPPNQHR |
13.28
|
-3.49 |
-3.62 |
|
TALPWSPESK |
18.39
|
1.11 |
0.98 |
|
RIVTPTLPPN |
18.62
|
-4.89 |
-5.02 |
| P32618 |
PAPLPSHYSS |
11.81
|
-4.66 |
-4.79 |
|
PSPKPSHKRN |
13.88
|
-3.02 |
-3.15 |
|
PSTSPSGRRM |
13.96
|
0.01 |
-0.12 |
| Q03497 |
FPSKNPLKNS |
11.83
|
-5.35 |
-5.48 |
|
KPSKPEAKSK |
13.87
|
-3.33 |
-3.46 |
|
LPPIPPTKSK |
14.14
|
-3.87 |
-4.00 |
| P39969 |
QPPKSPLLNN |
14.29
|
-4.30 |
-4.43 |
|
LSPIPSPTRN |
14.89
|
-5.40 |
-5.53 |
|
LPPQPGSKKG |
15.56
|
-2.70 |
-2.83 |
| P22224 |
FPSTPGTIDS |
14.27
|
-2.06 |
-2.19 |
|
TPSTPTFPNA |
17.81
|
-0.29 |
-0.42 |
|
TPTFPNANGV |
18.12
|
-2.43 |
-2.56 |
| P35735 |
ASPHFNPQSS |
18.25
|
-0.95 |
-1.08 |
|
SPHFNPQSSE |
18.27
|
-0.58 |
-0.71 |
|
PLASPHFNPQ |
18.80
|
-2.33 |
-2.46 |
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