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Matrix information:
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ADAN-name: BEM1-D2_1GCQ-17.PDB
Scoring matrix: BEM1-D2_1GCQ-17_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 16.4
Foldx random average score for Saccharomyces cerevisiae: 15.558 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1543815
Proteins after disorder filtering: 4592
Total fragments: 76505
Proteins after pattern filtering: 1990
Total fragments: 7195
Proteins after MINT filtering: 8
Total fragments: 52
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
16.40
|
-0.99 |
0.00 |
| Best peptides |
YPWRNGLRF |
0.00
|
-5.69 |
-4.70 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
VQPPQSPSF |
10.98
|
-3.82 |
-2.83 |
|
VPPQPGSKK |
11.07
|
-7.21 |
-6.22 |
|
YPSPVQPPQ |
12.09
|
-6.85 |
-5.86 |
| P29366 |
MPYIPGPVP |
13.82
|
-7.24 |
-6.25 |
|
YIPGPVPYV |
13.93
|
-5.05 |
-4.06 |
| P11433 |
SNPSATPNM |
14.78
|
-3.40 |
-2.41 |
| P50090 |
LPWSPESKN |
13.57
|
-4.73 |
-3.74 |
|
PTLPPNQHR |
14.83
|
-5.58 |
-4.59 |
| P32618 |
KEPSPKPSH |
12.02
|
-3.01 |
-2.02 |
|
PNLSPRLSN |
12.68
|
-5.10 |
-4.11 |
|
KVPAKEPSP |
12.91
|
-4.03 |
-3.04 |
| Q03497 |
HKPKVKPSK |
11.19
|
-4.76 |
-3.77 |
|
PPIPPTKSK |
11.29
|
-6.51 |
-5.52 |
|
PSKPEAKSK |
12.38
|
-3.03 |
-2.04 |
| P39969 |
LPPQPGSKK |
10.02
|
-7.78 |
-6.79 |
|
AQPPKSPLL |
12.33
|
-4.01 |
-3.02 |
|
YPSPAQPPK |
12.54
|
-6.16 |
-5.17 |
| P22224 |
YQSPMTPST |
11.46
|
-0.72 |
0.27 |
|
PMTPSTPTF |
13.90
|
-5.87 |
-4.88 |
|
PTFPNANGV |
15.12
|
-0.70 |
0.29 |
|
