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Matrix information:
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ADAN-name: BEM1-D2_1GCQ-15.PDB
Scoring matrix: BEM1-D2_1GCQ-15_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 22.23
Foldx random average score for Saccharomyces cerevisiae: 16.126 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1345890
Proteins after disorder filtering: 4009
Total fragments: 42799
Proteins after pattern filtering: 1691
Total fragments: 5411
Proteins after MINT filtering: 8
Total fragments: 39
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
22.23
|
-1.25 |
0.00 |
| Best peptides |
YWFRRWRRR |
0.00
|
-6.96 |
-5.71 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
PQSPSFNNR |
11.52
|
-7.92 |
-6.67 |
|
YPSPVQPPQ |
14.28
|
-5.88 |
-4.63 |
|
QPPQSPSFN |
14.66
|
-3.43 |
-2.18 |
| P29366 |
YIPGPVPYV |
15.22
|
-4.89 |
-3.64 |
|
IPGPVPYVT |
15.86
|
-3.95 |
-2.70 |
| P21268 |
KPISPPPSL |
14.25
|
-6.15 |
-4.90 |
| P50090 |
PTLPPNQHR |
14.77
|
-8.20 |
-6.95 |
|
LPWSPESKN |
15.43
|
-3.90 |
-2.65 |
| P32618 |
TPSTSPSGR |
12.68
|
-7.09 |
-5.84 |
|
PSPKPSHKR |
14.23
|
-6.44 |
-5.19 |
|
NPVISPYSS |
14.37
|
-4.12 |
-2.87 |
| Q03497 |
HKPKVKPSK |
13.02
|
-6.21 |
-4.96 |
|
FPSKNPLKN |
13.21
|
-6.10 |
-4.85 |
|
LPPIPPTKS |
13.90
|
-6.56 |
-5.31 |
| P39969 |
LSPIPSPTR |
12.86
|
-7.02 |
-5.77 |
|
QPPKSPLLN |
14.29
|
-4.30 |
-3.05 |
|
LPPQPGSKK |
14.99
|
-4.97 |
-3.72 |
| P35735 |
LASPHFNPQ |
15.41
|
-5.33 |
-4.08 |
|
