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Matrix information:
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ADAN-name: BEM1-D2_1GCQ-14.PDB
Scoring matrix: BEM1-D2_1GCQ-14_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 18.29
Foldx random average score for Saccharomyces cerevisiae: 14.120 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1376604
Proteins after disorder filtering: 4215
Total fragments: 51800
Proteins after pattern filtering: 1817
Total fragments: 6303
Proteins after MINT filtering: 8
Total fragments: 45
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
18.29
|
-4.30 |
0.00 |
| Best peptides |
IPFMRHRLR |
0.00
|
-9.06 |
-4.76 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
PQSPSFNNR |
10.74
|
-6.94 |
-2.64 |
|
QPPQSPSFN |
11.43
|
-4.55 |
-0.25 |
|
PPSYPSPVQ |
12.22
|
-5.82 |
-1.52 |
| P29366 |
KRIMPYIPG |
10.32
|
-7.19 |
-2.89 |
|
IMPYIPGPV |
11.23
|
-5.72 |
-1.42 |
|
IPGPVPYVT |
13.05
|
-5.80 |
-1.50 |
| P50090 |
PTLPPNQHR |
12.66
|
-8.29 |
-3.99 |
|
LPWSPESKN |
13.16
|
-3.82 |
0.48 |
|
VTPTLPPNQ |
13.61
|
-4.31 |
-0.01 |
| P32618 |
PSPKPSHKR |
9.07
|
-8.48 |
-4.18 |
|
TPSTSPSGR |
11.08
|
-9.18 |
-4.88 |
|
VPNLSPRLS |
11.94
|
-8.11 |
-3.81 |
| Q03497 |
FPSKNPLKN |
9.56
|
-6.32 |
-2.02 |
|
HKPKVKPSK |
12.04
|
-6.95 |
-2.65 |
|
LPPIPPTKS |
12.40
|
-8.54 |
-4.24 |
| P39969 |
QPPKSPLLN |
8.98
|
-6.89 |
-2.59 |
|
LSPIPSPTR |
10.75
|
-9.96 |
-5.66 |
|
PEENPITSM |
12.51
|
-7.01 |
-2.71 |
| P22224 |
TPSTPTFPN |
13.74
|
-6.44 |
-2.14 |
|
TPTFPNANG |
13.78
|
-5.96 |
-1.66 |
|
IFPSTPGTI |
13.82
|
-6.46 |
-2.16 |
| P35735 |
LASPHFNPQ |
12.44
|
-5.57 |
-1.27 |
|
