|
Matrix information:
(Help)
ADAN-name: BEM1-D2_1GCQ-11.PDB
Scoring matrix: BEM1-D2_1GCQ-11_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 17.12
Foldx random average score for Saccharomyces cerevisiae: 13.740 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3221900
Proteins after random average filtering: 7179
Total fragments: 1338646
Proteins after disorder filtering: 4741
Total fragments: 103965
Proteins after pattern filtering: 2293
Total fragments: 13921
Proteins after MINT filtering: 10
Total fragments: 117
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAA |
17.12
|
1.83 |
0.00 |
| Best peptides |
YRPRHGR |
0.00
|
-2.61 |
-4.44 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
PPSYPSP |
8.34
|
-6.11 |
-7.94 |
|
VPPQPGS |
9.29
|
-5.12 |
-6.95 |
|
RAPKPPS |
9.49
|
-6.77 |
-8.60 |
| P29366 |
MPYIPGP |
7.34
|
-7.12 |
-8.95 |
|
YIPGPVP |
10.06
|
-4.80 |
-6.63 |
|
RIMPYIP |
11.95
|
-1.42 |
-3.25 |
| P21268 |
KPISPPP |
10.52
|
-5.33 |
-7.16 |
|
PISPPPS |
11.31
|
-4.20 |
-6.03 |
|
SKPISPP |
11.31
|
-2.59 |
-4.42 |
| P11433 |
PSATPNM |
11.47
|
-3.98 |
-5.81 |
|
NPSATPN |
13.50
|
-1.29 |
-3.12 |
| P50090 |
TPTLPPN |
11.14
|
-5.42 |
-7.25 |
|
PTLPPNQ |
11.85
|
-3.57 |
-5.40 |
|
TALPWSP |
12.84
|
0.21 |
-1.62 |
| P32618 |
TNPMHPQ |
9.03
|
-3.17 |
-5.00 |
|
VPIVPGN |
9.17
|
-7.41 |
-9.24 |
|
EPIQPSS |
10.13
|
-4.56 |
-6.39 |
| Q03497 |
IPSRPAP |
7.73
|
-8.28 |
-10.11 |
|
APTTPNR |
8.25
|
-5.48 |
-7.31 |
|
PKVKPSK |
8.53
|
-6.15 |
-7.98 |
| P39969 |
PPSYPSP |
8.34
|
-6.11 |
-7.94 |
|
RRAPKPP |
8.62
|
-5.06 |
-6.89 |
|
PIPSPTR |
9.00
|
-4.81 |
-6.64 |
| P22224 |
FPSTPGT |
8.04
|
-5.70 |
-7.53 |
|
TPTFPNA |
10.13
|
-4.28 |
-6.11 |
|
SPMTPST |
10.52
|
-3.99 |
-5.82 |
| P35735 |
SPHFNPQ |
8.94
|
-3.62 |
-5.45 |
|
PHFNPQS |
11.87
|
-2.46 |
-4.29 |
|
ASPHFNP |
13.24
|
-1.65 |
-3.48 |
|
