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Matrix information:
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ADAN-name: BEM1-D1_JO8-QCF-29.PDB
Scoring matrix: BEM1-D1_JO8-QCF-29_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 19.83
Foldx random average score for Saccharomyces cerevisiae: 14.817 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3200363
Proteins after random average filtering: 7178
Total fragments: 1502263
Proteins after disorder filtering: 4240
Total fragments: 59362
Proteins after pattern filtering: 2112
Total fragments: 13261
Proteins after MINT filtering: 10
Total fragments: 102
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAAA |
19.83
|
-2.66 |
0.00 |
| Best peptides |
DHKPRPPRRK |
0.00
|
-9.23 |
-6.57 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
CFKLVPPQPG |
9.23
|
-9.06 |
-6.40 |
|
ESPGRAPKPP |
10.53
|
-10.06 |
-7.40 |
|
GRAPKPPSYP |
11.85
|
-7.78 |
-5.12 |
| P29366 |
PYIPGPVPYV |
12.14
|
-6.64 |
-3.98 |
|
IMPYIPGPVP |
12.48
|
-8.12 |
-5.46 |
|
YIPGPVPYVT |
14.55
|
-6.49 |
-3.83 |
| P21268 |
LSKPISPPPS |
11.66
|
-7.64 |
-4.98 |
|
PISPPPSLKK |
13.12
|
-7.64 |
-4.98 |
|
SKPISPPPSL |
13.54
|
-7.24 |
-4.58 |
| P11433 |
SNPSATPNME |
13.07
|
-8.52 |
-5.86 |
| P50090 |
PTLPPNQHRG |
10.13
|
-11.77 |
-9.11 |
|
VTPTLPPNQH |
11.74
|
-9.40 |
-6.74 |
|
ALPWSPESKN |
12.76
|
-8.13 |
-5.47 |
| P32618 |
EPAPLPSHYS |
7.95
|
-9.52 |
-6.86 |
|
EPSPKPSHKR |
9.68
|
-8.35 |
-5.69 |
|
PSPKPSHKRN |
10.64
|
-10.10 |
-7.44 |
| Q03497 |
NGKFIPSRPA |
6.68
|
-10.78 |
-8.12 |
|
KPKVKPSKPE |
8.69
|
-9.73 |
-7.07 |
|
SFPSKNPLKN |
9.38
|
-9.88 |
-7.22 |
| P39969 |
CFKLLPPQPG |
8.17
|
-9.56 |
-6.90 |
|
SPIPSPTRNS |
9.89
|
-8.17 |
-5.51 |
|
AQPPKSPLLN |
10.15
|
-9.41 |
-6.75 |
| P22224 |
MTPSTPTFPN |
12.82
|
-10.29 |
-7.63 |
|
IFPSTPGTID |
13.89
|
-7.80 |
-5.14 |
|
QSPMTPSTPT |
14.46
|
-7.39 |
-4.73 |
| P35735 |
ASPHFNPQSS |
12.70
|
-6.82 |
-4.16 |
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