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Matrix information:
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ADAN-name: BEM1-D1_JO8-QCF-28.PDB
Scoring matrix: BEM1-D1_JO8-QCF-28_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 20.15
Foldx random average score for Saccharomyces cerevisiae: 17.516 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3200363
Proteins after random average filtering: 7179
Total fragments: 1751145
Proteins after disorder filtering: 4465
Total fragments: 83873
Proteins after pattern filtering: 2151
Total fragments: 13510
Proteins after MINT filtering: 10
Total fragments: 105
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAAA |
20.15
|
-2.09 |
0.00 |
| Best peptides |
RRPRPPRKNK |
0.00
|
-8.73 |
-6.64 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
LVPPQPGSKK |
10.53
|
-10.57 |
-8.48 |
|
KLVPPQPGSK |
10.55
|
-9.18 |
-7.09 |
|
PPQSPSFNNR |
12.00
|
-10.44 |
-8.35 |
| P29366 |
YIPGPVPYVT |
13.72
|
-10.00 |
-7.91 |
|
PYIPGPVPYV |
16.49
|
-7.12 |
-5.03 |
| P21268 |
KPISPPPSLK |
9.35
|
-10.02 |
-7.93 |
|
PISPPPSLKK |
11.08
|
-10.87 |
-8.78 |
|
SKPISPPPSL |
15.28
|
-7.88 |
-5.79 |
| P11433 |
NSNPSATPNM |
15.24
|
-7.93 |
-5.84 |
| P50090 |
IVTPTLPPNQ |
13.03
|
-9.28 |
-7.19 |
|
TPTLPPNQHR |
13.72
|
-11.55 |
-9.46 |
|
PTLPPNQHRG |
16.41
|
-10.39 |
-8.30 |
| P32618 |
KEPSPKPSHK |
11.25
|
-8.96 |
-6.87 |
|
VPIVPGNNTT |
12.91
|
-10.96 |
-8.87 |
|
EPSPKPSHKR |
12.97
|
-13.27 |
-11.18 |
| Q03497 |
KPSKPEAKSK |
8.22
|
-8.98 |
-6.89 |
|
LPPIPPTKSK |
8.33
|
-10.34 |
-8.25 |
|
QPLPPIPPTK |
8.98
|
-10.99 |
-8.90 |
| P39969 |
PIPSPTRNSV |
10.41
|
-10.70 |
-8.61 |
|
KLLPPQPGSK |
10.46
|
-9.82 |
-7.73 |
|
LLPPQPGSKK |
10.93
|
-9.69 |
-7.60 |
| P22224 |
TPSTPTFPNA |
13.12
|
-9.62 |
-7.53 |
|
FPSTPGTIDS |
15.02
|
-7.76 |
-5.67 |
|
TPTFPNANGV |
15.95
|
-7.82 |
-5.73 |
| P35735 |
PHFNPQSSEK |
14.06
|
-7.44 |
-5.35 |
|
SPHFNPQSSE |
15.40
|
-7.79 |
-5.70 |
|
LASPHFNPQS |
17.28
|
-9.30 |
-7.21 |
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