|
Matrix information:
(Help)
ADAN-name: BEM1-D1_JO8-QCF-26.PDB
Scoring matrix: BEM1-D1_JO8-QCF-26_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 12.46
Foldx random average score for Saccharomyces cerevisiae: 11.659 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1713806
Proteins after disorder filtering: 4651
Total fragments: 119525
Proteins after pattern filtering: 2293
Total fragments: 21727
Proteins after MINT filtering: 10
Total fragments: 161
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
12.46
|
-1.35 |
0.00 |
| Best peptides |
SDPHRMKPR |
0.00
|
-3.33 |
-1.99 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
GRAPKPPSY |
6.38
|
-6.96 |
-5.62 |
|
KLVPPQPGS |
6.71
|
-6.87 |
-5.53 |
|
LVPPQPGSK |
6.92
|
-5.90 |
-4.56 |
| P29366 |
RIMPYIPGP |
5.84
|
-8.71 |
-7.37 |
|
PYIPGPVPY |
7.07
|
-5.41 |
-4.07 |
|
IMPYIPGPV |
9.75
|
-4.12 |
-2.78 |
| P21268 |
SKPISPPPS |
6.79
|
-6.60 |
-5.25 |
|
PISPPPSLK |
6.85
|
-5.12 |
-3.78 |
|
LSKPISPPP |
7.35
|
-6.73 |
-5.39 |
| P11433 |
NSNPSATPN |
8.09
|
-3.69 |
-2.34 |
|
SNPSATPNM |
9.04
|
-5.40 |
-4.06 |
| P50090 |
ALPWSPESK |
8.29
|
-4.04 |
-2.70 |
|
PTLPPNQHR |
8.38
|
-6.52 |
-5.17 |
|
VTPTLPPNQ |
9.08
|
-5.24 |
-3.90 |
| P32618 |
NDVPIVPGN |
6.24
|
-7.47 |
-6.13 |
|
KANPVISPY |
6.68
|
-5.92 |
-4.58 |
|
KEPSPKPSH |
6.68
|
-6.07 |
-4.73 |
| Q03497 |
PLPPIPPTK |
4.71
|
-8.43 |
-7.09 |
|
PSKPEAKSK |
5.50
|
-6.51 |
-5.17 |
|
HKPKVKPSK |
5.80
|
-7.48 |
-6.14 |
| P39969 |
RRAPKPPSY |
5.27
|
-7.14 |
-5.79 |
|
SPRRAPKPP |
6.06
|
-5.61 |
-4.27 |
|
LSPIPSPTR |
6.21
|
-6.08 |
-4.74 |
| P22224 |
QSPMTPSTP |
8.21
|
-4.91 |
-3.57 |
|
NGYQSPMTP |
9.37
|
-5.61 |
-4.27 |
|
PMTPSTPTF |
9.74
|
-5.60 |
-4.25 |
| P35735 |
ASPHFNPQS |
7.20
|
-5.31 |
-3.96 |
|
SPHFNPQSS |
8.42
|
-4.10 |
-2.75 |
|
PHFNPQSSE |
9.03
|
-3.21 |
-1.87 |
|
