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Matrix information:
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ADAN-name: BEM1-D1_JO8-QCF-23.PDB
Scoring matrix: BEM1-D1_JO8-QCF-23_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 9.38
Foldx random average score for Saccharomyces cerevisiae: 10.552 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3221900
Proteins after random average filtering: 7179
Total fragments: 1650573
Proteins after disorder filtering: 4924
Total fragments: 158146
Proteins after pattern filtering: 2278
Total fragments: 14492
Proteins after MINT filtering: 10
Total fragments: 98
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAA |
9.38
|
-1.06 |
0.00 |
| Best peptides |
RPRMPRP |
0.00
|
-1.20 |
-0.14 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
RAPKPPS |
5.29
|
-2.25 |
-1.19 |
|
PGRAPKP |
6.18
|
-4.07 |
-3.01 |
|
QPPQSPS |
6.45
|
-2.81 |
-1.75 |
| P29366 |
YIPGPVP |
6.98
|
-2.63 |
-1.57 |
|
IPGPVPY |
8.77
|
-2.33 |
-1.27 |
|
RIMPYIP |
9.57
|
-7.34 |
-6.28 |
| P21268 |
KPISPPP |
9.20
|
-4.58 |
-3.52 |
|
PISPPPS |
9.86
|
-2.92 |
-1.86 |
| P11433 |
NPSATPN |
7.03
|
-2.56 |
-1.50 |
|
SNPSATP |
8.79
|
-2.54 |
-1.48 |
| P50090 |
LPWSPES |
8.13
|
-2.12 |
-1.06 |
|
PWSPESK |
9.24
|
-3.53 |
-2.47 |
| P32618 |
KEPSPKP |
5.82
|
-3.47 |
-2.41 |
|
KVPAKEP |
6.05
|
-4.10 |
-3.04 |
|
SEPAPLP |
6.31
|
-3.79 |
-2.73 |
| Q03497 |
HKPKVKP |
5.06
|
-2.56 |
-1.50 |
|
IPSRPAP |
5.67
|
-3.29 |
-2.23 |
|
RPAPKPP |
6.24
|
-4.44 |
-3.38 |
| P39969 |
RAPKPPS |
5.29
|
-2.25 |
-1.19 |
|
PRRAPKP |
5.78
|
-4.96 |
-3.90 |
|
LPPQPGS |
5.80
|
-3.25 |
-2.19 |
| P22224 |
QSPMTPS |
6.46
|
-3.70 |
-2.64 |
|
MTPSTPT |
7.33
|
-3.19 |
-2.13 |
|
IFPSTPG |
8.59
|
-2.21 |
-1.15 |
| P35735 |
ASPHFNP |
7.28
|
-1.35 |
-0.29 |
|
PHFNPQS |
8.19
|
-1.13 |
-0.07 |
|
PLASPHF |
8.21
|
-2.02 |
-0.96 |
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