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Matrix information:
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ADAN-name: BEM1-D1_JO8-QCF-19.PDB
Scoring matrix: BEM1-D1_JO8-QCF-19_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 15.73
Foldx random average score for Saccharomyces cerevisiae: 16.031 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1594176
Proteins after disorder filtering: 4648
Total fragments: 102049
Proteins after pattern filtering: 2253
Total fragments: 12806
Proteins after MINT filtering: 10
Total fragments: 96
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
15.73
|
-0.72 |
0.00 |
| Best peptides |
YRTRPGRSF |
0.00
|
-1.47 |
-0.75 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
IFESPGRAP |
10.00
|
-6.37 |
-5.65 |
|
VPPQPGSKK |
10.17
|
-6.93 |
-6.21 |
|
PTSPTKQTF |
11.57
|
-5.34 |
-4.62 |
| P29366 |
KRIMPYIPG |
12.71
|
-5.09 |
-4.37 |
|
MPYIPGPVP |
13.50
|
-6.15 |
-5.43 |
|
YIPGPVPYV |
14.24
|
-4.55 |
-3.83 |
| P21268 |
NLSKPISPP |
14.99
|
-7.18 |
-6.46 |
| P11433 |
SNPSATPNM |
13.56
|
-5.27 |
-4.55 |
|
TNSNPSATP |
15.06
|
-4.68 |
-3.96 |
| P50090 |
PTLPPNQHR |
10.81
|
-10.11 |
-9.39 |
|
IVTPTLPPN |
13.06
|
-5.81 |
-5.09 |
|
RIVTPTLPP |
13.53
|
-5.82 |
-5.10 |
| P32618 |
VPIVPGNNT |
11.27
|
-5.11 |
-4.39 |
|
DSSTPSTSP |
11.60
|
-5.57 |
-4.85 |
|
KEPSPKPSH |
11.73
|
-7.51 |
-6.79 |
| Q03497 |
PPIPPTKSK |
8.88
|
-8.11 |
-7.39 |
|
HKPKVKPSK |
10.26
|
-3.80 |
-3.08 |
|
APTTPNRTS |
10.29
|
-3.46 |
-2.74 |
| P39969 |
LPPQPGSKK |
9.85
|
-6.25 |
-5.53 |
|
YPSPAQPPK |
10.69
|
-5.80 |
-5.08 |
|
PIPSPTRNS |
11.90
|
-4.89 |
-4.17 |
| P22224 |
FPSTPGTID |
10.35
|
-4.71 |
-3.99 |
|
PMTPSTPTF |
11.75
|
-6.61 |
-5.89 |
|
YQSPMTPST |
12.38
|
-6.45 |
-5.73 |
| P35735 |
PLASPHFNP |
12.28
|
-6.37 |
-5.65 |
|
LASPHFNPQ |
15.87
|
-5.11 |
-4.39 |
|
