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Matrix information:
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ADAN-name: BEM1-D1_JO8-QCF-18.PDB
Scoring matrix: BEM1-D1_JO8-QCF-18_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAAA
Foldx wt ligand score: 14.85
Foldx random average score for Saccharomyces cerevisiae: 12.709 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3200363
Proteins after random average filtering: 7179
Total fragments: 1473570
Proteins after disorder filtering: 4501
Total fragments: 77032
Proteins after pattern filtering: 2109
Total fragments: 9645
Proteins after MINT filtering: 10
Total fragments: 74
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAAA |
14.85
|
0.63 |
0.00 |
| Best peptides |
FPPLNSMWYD |
0.00
|
-0.45 |
-1.08 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
RAPKPPSYPS |
8.48
|
-4.65 |
-5.28 |
|
IFESPGRAPK |
8.54
|
-2.94 |
-3.57 |
|
VPPQPGSKKG |
8.98
|
-3.38 |
-4.01 |
| P29366 |
MPYIPGPVPY |
5.98
|
-5.32 |
-5.95 |
| P21268 |
LSKPISPPPS |
10.79
|
-2.64 |
-3.27 |
| P11433 |
TNSNPSATPN |
10.44
|
-1.50 |
-2.13 |
| P50090 |
TPTLPPNQHR |
10.40
|
-4.88 |
-5.51 |
|
RIVTPTLPPN |
11.22
|
-4.08 |
-4.71 |
| P32618 |
PSPKPSHKRN |
7.53
|
-3.25 |
-3.88 |
|
PAPLPSHYSS |
8.80
|
-2.76 |
-3.39 |
|
PAKEPSPKPS |
9.08
|
-3.19 |
-3.82 |
| Q03497 |
FPSKNPLKNS |
6.65
|
-6.10 |
-6.73 |
|
KQHKPKVKPS |
6.80
|
-3.67 |
-4.30 |
|
KKSFPSKNPL |
8.18
|
-3.22 |
-3.85 |
| P39969 |
LSPIPSPTRN |
7.40
|
-2.40 |
-3.03 |
|
LPPQPGSKKG |
7.75
|
-4.51 |
-5.14 |
|
RAPKPPSYPS |
8.48
|
-4.65 |
-5.28 |
| P22224 |
FPSTPGTIDS |
6.97
|
-2.87 |
-3.50 |
|
QSPMTPSTPT |
11.57
|
-3.87 |
-4.50 |
|
NGYQSPMTPS |
11.59
|
-1.89 |
-2.52 |
| P35735 |
PLASPHFNPQ |
9.92
|
-1.61 |
-2.24 |
|
LASPHFNPQS |
12.44
|
-1.75 |
-2.38 |
|
SPHFNPQSSE |
12.65
|
-1.59 |
-2.22 |
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