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Matrix information:
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ADAN-name: BEM1-D1_JO8-QCF-17.PDB
Scoring matrix: BEM1-D1_JO8-QCF-17_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 17.62
Foldx random average score for Saccharomyces cerevisiae: 18.351 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1723266
Proteins after disorder filtering: 4658
Total fragments: 96628
Proteins after pattern filtering: 2002
Total fragments: 6606
Proteins after MINT filtering: 9
Total fragments: 51
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
17.62
|
-0.89 |
0.00 |
| Best peptides |
YRFMNGRSK |
0.00
|
0.29 |
1.18 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
FESPGRAPK |
14.15
|
-5.53 |
-4.64 |
|
PKPPSYPSP |
14.23
|
-4.59 |
-3.70 |
|
QSNPTSPTK |
14.46
|
-2.42 |
-1.53 |
| P29366 |
RIMPYIPGP |
16.73
|
-5.84 |
-4.95 |
|
MPYIPGPVP |
16.79
|
-5.79 |
-4.90 |
|
KRIMPYIPG |
17.83
|
-4.11 |
-3.22 |
| P21268 |
LSKPISPPP |
16.92
|
-4.54 |
-3.65 |
| P11433 |
SNPSATPNM |
17.73
|
-2.52 |
-1.63 |
| P32618 |
KVPAKEPSP |
13.97
|
-6.10 |
-5.21 |
|
SNEPIQPSS |
15.17
|
-2.47 |
-1.58 |
|
STPSTSPSG |
16.82
|
-0.88 |
0.01 |
| Q03497 |
HKPKVKPSK |
9.04
|
-4.86 |
-3.97 |
|
PSKPEAKSK |
11.71
|
-3.07 |
-2.18 |
|
PPIPPTKSK |
13.81
|
-5.39 |
-4.50 |
| P39969 |
YPSPAQPPK |
12.96
|
-5.76 |
-4.87 |
|
LPPQPGSKK |
13.33
|
-6.17 |
-5.28 |
|
PKPPSYPSP |
14.23
|
-4.59 |
-3.70 |
| P22224 |
YQSPMTPST |
16.40
|
-3.97 |
-3.08 |
|
PMTPSTPTF |
16.82
|
-4.54 |
-3.65 |
|
PTFPNANGV |
17.38
|
-2.34 |
-1.45 |
| P35735 |
ASPHFNPQS |
17.85
|
0.31 |
1.20 |
|
