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Matrix information:
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ADAN-name: BEM1-D1_JO8-QCF-16.PDB
Scoring matrix: BEM1-D1_JO8-QCF-16_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 14.46
Foldx random average score for Saccharomyces cerevisiae: 13.933 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1574548
Proteins after disorder filtering: 4708
Total fragments: 113706
Proteins after pattern filtering: 2208
Total fragments: 11499
Proteins after MINT filtering: 10
Total fragments: 93
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
14.46
|
1.31 |
0.00 |
| Best peptides |
RPPLNSIEM |
0.00
|
-0.75 |
-2.06 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
RAPKPPSYP |
9.46
|
-3.79 |
-5.10 |
|
IFESPGRAP |
9.66
|
-2.51 |
-3.82 |
|
CFKLVPPQP |
9.85
|
-5.94 |
-7.25 |
| P29366 |
MPYIPGPVP |
6.73
|
-5.75 |
-7.06 |
|
KRIMPYIPG |
10.44
|
-3.43 |
-4.74 |
| P21268 |
LNLSKPISP |
11.41
|
-2.71 |
-4.02 |
|
LSKPISPPP |
12.15
|
-2.90 |
-4.21 |
|
NLSKPISPP |
13.24
|
-1.42 |
-2.73 |
| P11433 |
TNSNPSATP |
11.49
|
0.02 |
-1.29 |
|
NPSATPNME |
12.39
|
-1.89 |
-3.20 |
|
SNPSATPNM |
13.22
|
-1.90 |
-3.21 |
| P50090 |
TPTLPPNQH |
12.79
|
-3.94 |
-5.25 |
|
LPWSPESKN |
12.85
|
-3.79 |
-5.10 |
|
TALPWSPES |
13.33
|
0.73 |
-0.58 |
| P32618 |
VSYSPSNEP |
8.17
|
0.27 |
-1.04 |
|
PSPKPSHKR |
8.41
|
-3.12 |
-4.43 |
|
PAPLPSHYS |
8.86
|
-2.82 |
-4.13 |
| Q03497 |
FPSKNPLKN |
8.62
|
-5.81 |
-7.12 |
|
KKSFPSKNP |
9.24
|
-2.39 |
-3.70 |
|
KQHKPKVKP |
9.58
|
-4.03 |
-5.34 |
| P39969 |
LSPIPSPTR |
6.72
|
-2.66 |
-3.97 |
|
LPPQPGSKK |
8.84
|
-3.97 |
-5.28 |
|
CFKLLPPQP |
9.46
|
-4.58 |
-5.89 |
| P22224 |
FPSTPGTID |
8.14
|
-4.09 |
-5.40 |
|
QSPMTPSTP |
11.99
|
-4.21 |
-5.52 |
|
NGYQSPMTP |
12.49
|
-1.42 |
-2.73 |
| P35735 |
PLASPHFNP |
11.67
|
-1.62 |
-2.93 |
|
ASPHFNPQS |
11.70
|
-0.22 |
-1.53 |
|
SPHFNPQSS |
13.74
|
-1.09 |
-2.40 |
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