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Matrix information:
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ADAN-name: BEM1-D1_JO8-QCF-13.PDB
Scoring matrix: BEM1-D1_JO8-QCF-13_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 15.75
Foldx random average score for Saccharomyces cerevisiae: 14.602 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3214721
Proteins after random average filtering: 7179
Total fragments: 1531828
Proteins after disorder filtering: 4805
Total fragments: 102999
Proteins after pattern filtering: 2268
Total fragments: 14150
Proteins after MINT filtering: 10
Total fragments: 112
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
15.75
|
0.76 |
0.00 |
| Best peptides |
RHPRGPRW |
0.00
|
-2.27 |
-3.02 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
SPGRAPKP |
7.27
|
-6.32 |
-7.08 |
|
PPQPGSKK |
9.82
|
-3.47 |
-4.23 |
|
QPPQSPSF |
10.53
|
-2.94 |
-3.69 |
| P29366 |
KRIMPYIP |
10.48
|
-7.08 |
-7.84 |
|
MPYIPGPV |
10.55
|
-6.64 |
-7.39 |
|
PYIPGPVP |
12.07
|
-3.19 |
-3.94 |
| P21268 |
SKPISPPP |
12.16
|
-3.40 |
-4.16 |
|
KPISPPPS |
12.67
|
-6.03 |
-6.79 |
|
NLSKPISP |
12.92
|
-5.11 |
-5.87 |
| P11433 |
PSATPNME |
13.57
|
-5.02 |
-5.77 |
|
NSNPSATP |
13.62
|
-0.24 |
-1.00 |
| P50090 |
RIVTPTLP |
9.73
|
-6.15 |
-6.91 |
|
TPTLPPNQ |
12.53
|
-7.19 |
-7.95 |
|
ALPWSPES |
12.78
|
-0.98 |
-1.73 |
| P32618 |
VPNLSPRL |
5.91
|
-6.96 |
-7.71 |
|
NPVISPYS |
9.66
|
-3.53 |
-4.29 |
|
GPKVPAKE |
10.32
|
-5.91 |
-6.67 |
| Q03497 |
IPSRPAPK |
8.77
|
-6.06 |
-6.81 |
|
GKFIPSRP |
8.87
|
-7.49 |
-8.25 |
|
APTTPNRT |
9.80
|
-7.86 |
-8.62 |
| P39969 |
SPRRAPKP |
6.81
|
-5.77 |
-6.52 |
|
QPPKSPLL |
7.40
|
-5.19 |
-5.95 |
|
PPQPGSKK |
9.82
|
-3.47 |
-4.23 |
| P22224 |
PSTPGTID |
11.86
|
-2.43 |
-3.19 |
|
TPSTPTFP |
13.54
|
-6.00 |
-6.75 |
|
FPSTPGTI |
13.54
|
-4.79 |
-5.54 |
| P35735 |
SPHFNPQS |
13.33
|
-4.20 |
-4.96 |
|
PHFNPQSS |
13.55
|
-3.53 |
-4.29 |
|
ASPHFNPQ |
14.42
|
-2.22 |
-2.98 |
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