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Matrix information:
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ADAN-name: BEM1-D1_JO8-QCF-12.PDB
Scoring matrix: BEM1-D1_JO8-QCF-12_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 10.95
Foldx random average score for Saccharomyces cerevisiae: 10.744 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3214721
Proteins after random average filtering: 7179
Total fragments: 1651771
Proteins after disorder filtering: 4755
Total fragments: 98900
Proteins after pattern filtering: 2189
Total fragments: 9442
Proteins after MINT filtering: 10
Total fragments: 71
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
10.95
|
-0.48 |
0.00 |
| Best peptides |
YEFRPKFK |
0.00
|
-1.86 |
-1.38 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
PGRAPKPP |
5.63
|
-3.09 |
-2.61 |
|
PSPVQPPQ |
8.10
|
-2.69 |
-2.21 |
|
FKLVPPQP |
8.37
|
-2.43 |
-1.95 |
| P29366 |
YIPGPVPY |
8.37
|
-3.48 |
-3.00 |
|
MPYIPGPV |
9.35
|
-2.82 |
-2.34 |
|
PGPVPYVT |
9.46
|
-3.65 |
-3.17 |
| P21268 |
SKPISPPP |
6.81
|
-2.70 |
-2.22 |
|
NLSKPISP |
9.36
|
-2.62 |
-2.14 |
| P11433 |
SNPSATPN |
9.86
|
-2.18 |
-1.70 |
| P50090 |
ALPWSPES |
10.11
|
-2.24 |
-1.76 |
|
VTPTLPPN |
10.62
|
-2.03 |
-1.55 |
| P32618 |
KEPSPKPS |
4.85
|
-4.00 |
-3.52 |
|
SEPAPLPS |
4.92
|
-4.87 |
-4.39 |
|
NEPIQPSS |
7.43
|
-2.71 |
-2.23 |
| Q03497 |
SRPAPKPP |
4.11
|
-3.94 |
-3.46 |
|
HKPKVKPS |
6.14
|
-4.34 |
-3.86 |
|
GKFIPSRP |
7.62
|
-2.69 |
-2.21 |
| P39969 |
PRRAPKPP |
4.59
|
-3.94 |
-3.46 |
|
VSPRRAPK |
5.98
|
-3.10 |
-2.62 |
|
PSPAQPPK |
7.34
|
-2.82 |
-2.34 |
| P22224 |
GYQSPMTP |
8.90
|
-4.35 |
-3.87 |
|
MTPSTPTF |
9.68
|
-2.15 |
-1.67 |
|
IFPSTPGT |
9.74
|
-2.46 |
-1.98 |
| P35735 |
ASPHFNPQ |
7.43
|
-2.68 |
-2.20 |
|
PLASPHFN |
7.83
|
-3.99 |
-3.51 |
|
PHFNPQSS |
8.27
|
-3.25 |
-2.77 |
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