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Matrix information:
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ADAN-name: BEM1-D1_JO8-QCF-11.PDB
Scoring matrix: BEM1-D1_JO8-QCF-11_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 14.69
Foldx random average score for Saccharomyces cerevisiae: 11.586 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3221900
Proteins after random average filtering: 7179
Total fragments: 1281222
Proteins after disorder filtering: 4583
Total fragments: 83359
Proteins after pattern filtering: 2287
Total fragments: 13646
Proteins after MINT filtering: 10
Total fragments: 105
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAA |
14.69
|
-0.43 |
0.00 |
| Best peptides |
FRPRPRR |
0.00
|
-4.33 |
-3.90 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
RAPKPPS |
8.24
|
-5.72 |
-5.29 |
|
NPTSPTK |
8.29
|
-5.66 |
-5.23 |
|
PPSYPSP |
8.38
|
-7.31 |
-6.88 |
| P29366 |
MPYIPGP |
6.41
|
-7.46 |
-7.03 |
|
YIPGPVP |
9.01
|
-6.04 |
-5.61 |
|
RIMPYIP |
9.78
|
-4.94 |
-4.51 |
| P21268 |
KPISPPP |
8.22
|
-6.94 |
-6.51 |
|
PISPPPS |
9.71
|
-7.02 |
-6.59 |
|
SKPISPP |
10.94
|
-3.00 |
-2.57 |
| P11433 |
PSATPNM |
10.52
|
-5.04 |
-4.61 |
|
NPSATPN |
11.25
|
-3.36 |
-2.93 |
| P50090 |
TPTLPPN |
8.87
|
-6.76 |
-6.33 |
|
PTLPPNQ |
10.22
|
-5.93 |
-5.50 |
|
VTPTLPP |
10.26
|
-3.50 |
-3.07 |
| P32618 |
PSPKPSH |
6.58
|
-5.55 |
-5.12 |
|
VPIVPGN |
7.52
|
-6.12 |
-5.69 |
|
GPKVPAK |
8.12
|
-6.41 |
-5.98 |
| Q03497 |
PKVKPSK |
6.29
|
-6.30 |
-5.87 |
|
IPSRPAP |
6.33
|
-6.74 |
-6.31 |
|
FPSKNPL |
6.69
|
-5.37 |
-4.94 |
| P39969 |
PRRAPKP |
6.71
|
-6.61 |
-6.18 |
|
RRAPKPP |
7.35
|
-4.66 |
-4.23 |
|
SPAQPPK |
7.53
|
-7.07 |
-6.64 |
| P22224 |
FPSTPGT |
7.86
|
-7.07 |
-6.64 |
|
TPSTPTF |
8.78
|
-5.97 |
-5.54 |
|
STPTFPN |
9.13
|
-4.27 |
-3.84 |
| P35735 |
ASPHFNP |
10.26
|
-3.72 |
-3.29 |
|
PLASPHF |
10.27
|
-5.34 |
-4.91 |
|
SPHFNPQ |
10.27
|
-4.29 |
-3.86 |
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