|
Matrix information:
(Help)
ADAN-name: BEM1-D1_JO8-LCK-8.PDB
Scoring matrix: BEM1-D1_JO8-LCK-8_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 10.48
Foldx random average score for Saccharomyces cerevisiae: 12.415 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3214721
Proteins after random average filtering: 7179
Total fragments: 1506065
Proteins after disorder filtering: 4803
Total fragments: 148254
Proteins after pattern filtering: 2341
Total fragments: 21121
Proteins after MINT filtering: 10
Total fragments: 158
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
10.48
|
-3.30 |
0.00 |
| Best peptides |
DRNFWFPM |
0.00
|
3.44 |
6.74 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
RAPKPPSY |
5.38
|
-4.54 |
-1.24 |
|
FKLVPPQP |
5.74
|
-5.21 |
-1.91 |
|
PKPPSYPS |
5.92
|
-5.09 |
-1.79 |
| P29366 |
KRIMPYIP |
4.95
|
-4.58 |
-1.28 |
|
IMPYIPGP |
7.60
|
-8.77 |
-5.47 |
|
MPYIPGPV |
8.03
|
-2.79 |
0.51 |
| P21268 |
SKPISPPP |
5.08
|
-5.29 |
-1.99 |
|
KPISPPPS |
6.89
|
-6.05 |
-2.75 |
|
PISPPPSL |
8.44
|
-3.86 |
-0.56 |
| P11433 |
SNPSATPN |
8.28
|
-3.28 |
0.02 |
|
NSNPSATP |
8.88
|
-2.57 |
0.73 |
|
PSATPNME |
10.63
|
-1.06 |
2.24 |
| P50090 |
TALPWSPE |
7.15
|
-3.34 |
-0.04 |
|
TPTLPPNQ |
8.46
|
-3.89 |
-0.59 |
|
LPWSPESK |
8.88
|
-1.36 |
1.94 |
| P32618 |
VPNLSPRL |
5.80
|
-5.32 |
-2.02 |
|
SEPAPLPS |
6.16
|
-3.49 |
-0.19 |
|
KEPSPKPS |
6.25
|
-3.48 |
-0.18 |
| Q03497 |
SRPAPKPP |
3.22
|
-6.18 |
-2.88 |
|
LPPIPPTK |
6.02
|
-7.26 |
-3.96 |
|
EQPLPPIP |
6.26
|
-6.41 |
-3.11 |
| P39969 |
PRRAPKPP |
3.42
|
-2.48 |
0.82 |
|
RAPKPPSY |
5.38
|
-4.54 |
-1.24 |
|
SPRRAPKP |
5.72
|
-5.44 |
-2.14 |
| P22224 |
SPMTPSTP |
7.67
|
-2.85 |
0.45 |
|
TPSTPTFP |
8.26
|
-2.44 |
0.86 |
|
FPSTPGTI |
8.96
|
-3.08 |
0.22 |
| P35735 |
PHFNPQSS |
10.20
|
-2.33 |
0.97 |
|
SPHFNPQS |
11.62
|
-5.40 |
-2.10 |
|
PLASPHFN |
11.84
|
-2.97 |
0.33 |
|
