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Matrix information:
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ADAN-name: BEM1-D1_JO8-LCK-5.PDB
Scoring matrix: BEM1-D1_JO8-LCK-5_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 21.84
Foldx random average score for Saccharomyces cerevisiae: 27.342 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3200363
Proteins after random average filtering: 7179
Total fragments: 1466185
Proteins after disorder filtering: 4584
Total fragments: 100369
Proteins after pattern filtering: 2300
Total fragments: 20328
Proteins after MINT filtering: 10
Total fragments: 139
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAAA |
21.84
|
1.10 |
0.00 |
| Best peptides |
RRNYPAGDIP |
0.00
|
-0.29 |
-1.39 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
LVPPQPGSKK |
14.64
|
-2.31 |
-3.41 |
|
GRAPKPPSYP |
15.48
|
-7.14 |
-8.24 |
|
RAPKPPSYPS |
16.74
|
-5.50 |
-6.60 |
| P29366 |
IMPYIPGPVP |
10.49
|
-4.71 |
-5.81 |
|
KRIMPYIPGP |
18.72
|
-6.39 |
-7.49 |
|
MPYIPGPVPY |
20.92
|
-7.50 |
-8.60 |
| P21268 |
LNLSKPISPP |
19.48
|
-6.78 |
-7.88 |
|
KPISPPPSLK |
20.23
|
-7.47 |
-8.57 |
|
PISPPPSLKK |
20.59
|
-3.68 |
-4.78 |
| P11433 |
YTNSNPSATP |
20.44
|
-4.56 |
-5.66 |
|
NSNPSATPNM |
24.17
|
-3.18 |
-4.28 |
| P50090 |
ASTALPWSPE |
19.27
|
-4.35 |
-5.45 |
|
ALPWSPESKN |
19.64
|
-4.86 |
-5.96 |
|
VTPTLPPNQH |
20.24
|
4.48 |
3.38 |
| P32618 |
PVSYSPSNEP |
15.35
|
-5.62 |
-6.72 |
|
DVPIVPGNNT |
16.30
|
-2.15 |
-3.25 |
|
VGPKVPAKEP |
17.56
|
-4.15 |
-5.25 |
| Q03497 |
HKQHKPKVKP |
14.84
|
-6.29 |
-7.39 |
|
IPSRPAPKPP |
15.01
|
-9.05 |
-10.15 |
|
FIPSRPAPKP |
16.36
|
-7.00 |
-8.10 |
| P39969 |
RRAPKPPSYP |
11.65
|
-6.95 |
-8.05 |
|
VSPRRAPKPP |
13.29
|
-7.58 |
-8.68 |
|
LLPPQPGSKK |
15.73
|
-5.43 |
-6.53 |
| P22224 |
IFPSTPGTID |
15.81
|
-7.58 |
-8.68 |
|
QSPMTPSTPT |
21.06
|
-3.66 |
-4.76 |
|
SNGYQSPMTP |
22.48
|
-6.46 |
-7.56 |
| P35735 |
SPHFNPQSSE |
22.44
|
-5.62 |
-6.72 |
|
ASPHFNPQSS |
24.32
|
-3.45 |
-4.55 |
|
PHFNPQSSEK |
24.63
|
-3.44 |
-4.54 |
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