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Matrix information:
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ADAN-name: BEM1-D1_JO8-LCK-4.PDB
Scoring matrix: BEM1-D1_JO8-LCK-4_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 17.61
Foldx random average score for Saccharomyces cerevisiae: 15.470 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3200363
Proteins after random average filtering: 7179
Total fragments: 1396484
Proteins after disorder filtering: 4433
Total fragments: 77550
Proteins after pattern filtering: 2274
Total fragments: 18118
Proteins after MINT filtering: 10
Total fragments: 132
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAAA |
17.61
|
4.01 |
0.00 |
| Best peptides |
MRPYRFRWRH |
0.00
|
8.04 |
4.03 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
GRAPKPPSYP |
10.45
|
-8.37 |
-12.38 |
|
PSYPSPVQPP |
10.60
|
-2.39 |
-6.40 |
|
ESPGRAPKPP |
10.60
|
-3.02 |
-7.03 |
| P29366 |
IMPYIPGPVP |
7.95
|
-3.96 |
-7.97 |
|
KRIMPYIPGP |
8.53
|
-5.97 |
-9.98 |
|
PYIPGPVPYV |
13.21
|
-3.16 |
-7.17 |
| P21268 |
LNLSKPISPP |
9.03
|
-4.88 |
-8.89 |
|
SKPISPPPSL |
12.23
|
-1.01 |
-5.02 |
|
PLNLSKPISP |
12.53
|
-3.69 |
-7.70 |
| P11433 |
YTNSNPSATP |
11.96
|
-1.76 |
-5.77 |
|
NSNPSATPNM |
14.62
|
-1.41 |
-5.42 |
| P50090 |
VTPTLPPNQH |
9.77
|
-2.34 |
-6.35 |
|
ASTALPWSPE |
11.36
|
-0.53 |
-4.54 |
|
ALPWSPESKN |
12.88
|
-1.25 |
-5.26 |
| P32618 |
PVSYSPSNEP |
9.25
|
-3.24 |
-7.25 |
|
AKEPSPKPSH |
9.73
|
-2.07 |
-6.08 |
|
KSEPAPLPSH |
10.73
|
1.89 |
-2.12 |
| Q03497 |
HKQHKPKVKP |
7.68
|
-4.31 |
-8.32 |
|
FIPSRPAPKP |
8.16
|
-4.03 |
-8.04 |
|
HKPKVKPSKP |
8.96
|
-5.96 |
-9.97 |
| P39969 |
RRAPKPPSYP |
7.41
|
-3.07 |
-7.08 |
|
VSPRRAPKPP |
7.55
|
-6.15 |
-10.16 |
|
CFKLLPPQPG |
10.81
|
-2.20 |
-6.21 |
| P22224 |
MTPSTPTFPN |
9.29
|
-1.82 |
-5.83 |
|
IFPSTPGTID |
10.85
|
-2.09 |
-6.10 |
|
QSPMTPSTPT |
11.82
|
0.81 |
-3.20 |
| P35735 |
PLASPHFNPQ |
12.99
|
-3.20 |
-7.21 |
|
LASPHFNPQS |
13.44
|
-2.92 |
-6.93 |
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