|
Matrix information:
(Help)
ADAN-name: BEM1-D1_JO8-LCK-29.PDB
Scoring matrix: BEM1-D1_JO8-LCK-29_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 18.41
Foldx random average score for Saccharomyces cerevisiae: 13.380 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3200363
Proteins after random average filtering: 7179
Total fragments: 1326587
Proteins after disorder filtering: 4436
Total fragments: 63194
Proteins after pattern filtering: 2099
Total fragments: 11555
Proteins after MINT filtering: 9
Total fragments: 76
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAAA |
18.41
|
2.76 |
0.00 |
| Best peptides |
RMRPGTKHFH |
0.00
|
-0.83 |
-3.59 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
GRAPKPPSYP |
9.00
|
-4.25 |
-7.01 |
|
PPQPGSKKGL |
9.60
|
-2.88 |
-5.64 |
|
VQPPQSPSFN |
9.73
|
-4.91 |
-7.67 |
| P29366 |
PYIPGPVPYV |
6.38
|
-4.47 |
-7.23 |
|
IMPYIPGPVP |
11.14
|
-7.57 |
-10.33 |
|
YIPGPVPYVT |
12.69
|
-5.03 |
-7.79 |
| P21268 |
LNLSKPISPP |
9.93
|
-5.59 |
-8.35 |
|
KPISPPPSLK |
12.35
|
-5.43 |
-8.19 |
|
SKPISPPPSL |
12.73
|
-5.48 |
-8.24 |
| P11433 |
SNPSATPNME |
8.91
|
-9.13 |
-11.89 |
| P50090 |
ALPWSPESKN |
11.94
|
-7.03 |
-9.79 |
|
VTPTLPPNQH |
12.32
|
-8.96 |
-11.72 |
|
PTLPPNQHRG |
12.79
|
-9.78 |
-12.54 |
| P32618 |
EPSPKPSHKR |
7.50
|
-6.56 |
-9.32 |
|
DVPIVPGNNT |
9.65
|
-7.35 |
-10.11 |
|
KVPAKEPSPK |
10.06
|
-5.30 |
-8.06 |
| Q03497 |
SFPSKNPLKN |
7.71
|
-8.60 |
-11.36 |
|
KPKVKPSKPE |
8.14
|
-4.70 |
-7.46 |
|
VKPSKPEAKS |
8.80
|
-6.61 |
-9.37 |
| P39969 |
AQPPKSPLLN |
6.20
|
-7.22 |
-9.98 |
|
RRAPKPPSYP |
8.57
|
-5.58 |
-8.34 |
|
PPQPGSKKGL |
9.60
|
-2.88 |
-5.64 |
| P22224 |
MTPSTPTFPN |
10.96
|
-7.68 |
-10.44 |
|
STPTFPNANG |
12.52
|
-4.88 |
-7.64 |
|
SNGYQSPMTP |
12.53
|
-4.12 |
-6.88 |
|
