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Matrix information:
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ADAN-name: BEM1-D1_JO8-LCK-26.PDB
Scoring matrix: BEM1-D1_JO8-LCK-26_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 15.08
Foldx random average score for Saccharomyces cerevisiae: 11.071 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1426963
Proteins after disorder filtering: 4552
Total fragments: 81882
Proteins after pattern filtering: 2258
Total fragments: 16687
Proteins after MINT filtering: 10
Total fragments: 123
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
15.08
|
-2.52 |
0.00 |
| Best peptides |
DDRPRGMPW |
0.00
|
-1.37 |
1.15 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
VQPPQSPSF |
6.78
|
-7.16 |
-4.64 |
|
VPPQPGSKK |
7.21
|
-3.63 |
-1.11 |
|
GRAPKPPSY |
7.60
|
-6.93 |
-4.41 |
| P29366 |
MPYIPGPVP |
6.62
|
-4.77 |
-2.25 |
|
RIMPYIPGP |
6.84
|
-7.62 |
-5.10 |
|
KRIMPYIPG |
8.80
|
-5.29 |
-2.77 |
| P21268 |
SKPISPPPS |
8.43
|
-6.84 |
-4.32 |
|
KPISPPPSL |
8.56
|
-4.22 |
-1.70 |
|
LSKPISPPP |
8.63
|
-5.92 |
-3.40 |
| P11433 |
SNPSATPNM |
9.93
|
-6.76 |
-4.24 |
|
NSNPSATPN |
10.88
|
-2.91 |
-0.39 |
| P50090 |
IVTPTLPPN |
7.59
|
-5.82 |
-3.30 |
|
PTLPPNQHR |
8.93
|
-6.82 |
-4.30 |
|
TALPWSPES |
9.24
|
-6.36 |
-3.84 |
| P32618 |
SEPAPLPSH |
5.28
|
-7.90 |
-5.38 |
|
KEPSPKPSH |
5.87
|
-7.21 |
-4.69 |
|
NDVPIVPGN |
6.25
|
-6.29 |
-3.77 |
| Q03497 |
HKPKVKPSK |
5.01
|
-7.22 |
-4.70 |
|
KFIPSRPAP |
5.31
|
-6.89 |
-4.37 |
|
PLPPIPPTK |
6.35
|
-7.83 |
-5.31 |
| P39969 |
RRAPKPPSY |
6.43
|
-7.22 |
-4.70 |
|
LPPQPGSKK |
7.38
|
-3.85 |
-1.33 |
|
YPSPAQPPK |
7.66
|
-6.58 |
-4.06 |
| P22224 |
PMTPSTPTF |
9.57
|
-4.87 |
-2.35 |
|
STPTFPNAN |
10.10
|
-4.63 |
-2.11 |
|
TPSTPTFPN |
10.37
|
-5.01 |
-2.49 |
| P35735 |
ASPHFNPQS |
10.10
|
-5.46 |
-2.94 |
|
LASPHFNPQ |
10.16
|
-4.01 |
-1.49 |
|
SPHFNPQSS |
10.47
|
-2.86 |
-0.34 |
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