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Matrix information:
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ADAN-name: BEM1-D1_JO8-LCK-2.PDB
Scoring matrix: BEM1-D1_JO8-LCK-2_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 19.33
Foldx random average score for Saccharomyces cerevisiae: 18.055 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3200363
Proteins after random average filtering: 7179
Total fragments: 1370736
Proteins after disorder filtering: 4413
Total fragments: 81408
Proteins after pattern filtering: 2257
Total fragments: 17734
Proteins after MINT filtering: 10
Total fragments: 123
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAAA |
19.33
|
3.15 |
0.00 |
| Best peptides |
IRRRRFRDRR |
0.00
|
5.77 |
2.62 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
GRAPKPPSYP |
12.19
|
-2.06 |
-5.21 |
|
IFESPGRAPK |
12.30
|
-5.39 |
-8.54 |
|
FKLVPPQPGS |
12.45
|
0.94 |
-2.21 |
| P29366 |
KRIMPYIPGP |
9.54
|
-4.61 |
-7.76 |
|
IMPYIPGPVP |
11.51
|
-3.40 |
-6.55 |
|
PYIPGPVPYV |
14.58
|
-0.34 |
-3.49 |
| P21268 |
LNLSKPISPP |
10.14
|
-4.35 |
-7.50 |
|
SKPISPPPSL |
13.68
|
-1.64 |
-4.79 |
|
KPISPPPSLK |
15.56
|
-4.03 |
-7.18 |
| P11433 |
TNSNPSATPN |
16.75
|
-1.89 |
-5.04 |
| P50090 |
IVTPTLPPNQ |
13.56
|
-2.83 |
-5.98 |
|
ASTALPWSPE |
14.45
|
-0.05 |
-3.20 |
|
TALPWSPESK |
17.21
|
-1.04 |
-4.19 |
| P32618 |
AKEPSPKPSH |
11.22
|
0.13 |
-3.02 |
|
PVSYSPSNEP |
12.70
|
-3.68 |
-6.83 |
|
VPAKEPSPKP |
12.77
|
-5.23 |
-8.38 |
| Q03497 |
HKQHKPKVKP |
6.21
|
-3.50 |
-6.65 |
|
IPSRPAPKPP |
10.26
|
-6.71 |
-9.86 |
|
HKPKVKPSKP |
11.01
|
-6.92 |
-10.07 |
| P39969 |
RRAPKPPSYP |
8.46
|
-3.89 |
-7.04 |
|
VSPRRAPKPP |
10.06
|
-6.58 |
-9.73 |
|
ARSSSPEENP |
12.13
|
-2.58 |
-5.73 |
| P22224 |
QSPMTPSTPT |
13.84
|
-0.79 |
-3.94 |
|
IFPSTPGTID |
14.35
|
-1.86 |
-5.01 |
|
PSTPTFPNAN |
15.96
|
-2.63 |
-5.78 |
| P35735 |
PHFNPQSSEK |
15.02
|
-4.59 |
-7.74 |
|
LASPHFNPQS |
16.10
|
-2.85 |
-6.00 |
|
ASPHFNPQSS |
17.73
|
-0.84 |
-3.99 |
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