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Matrix information:
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ADAN-name: BEM1-D1_JO8-LCK-15.PDB
Scoring matrix: BEM1-D1_JO8-LCK-15_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 20.38
Foldx random average score for Saccharomyces cerevisiae: 14.730 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1551074
Proteins after disorder filtering: 4499
Total fragments: 58288
Proteins after pattern filtering: 1882
Total fragments: 6378
Proteins after MINT filtering: 9
Total fragments: 48
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
20.38
|
0.62 |
0.00 |
| Best peptides |
HPWGIRKNK |
0.00
|
5.06 |
4.44 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
VPPQPGSKK |
11.71
|
-3.10 |
-3.72 |
|
PQSPSFNNR |
12.00
|
-3.87 |
-4.49 |
|
FESPGRAPK |
12.05
|
-2.22 |
-2.84 |
| P29366 |
YIPGPVPYV |
8.27
|
-4.12 |
-4.74 |
|
MPYIPGPVP |
14.11
|
-5.87 |
-6.49 |
| P21268 |
KPISPPPSL |
12.54
|
-3.77 |
-4.39 |
|
PISPPPSLK |
13.40
|
-3.71 |
-4.33 |
| P11433 |
SNPSATPNM |
14.11
|
-0.89 |
-1.51 |
|
NPSATPNME |
14.68
|
-1.70 |
-2.32 |
| P50090 |
ALPWSPESK |
12.07
|
-3.19 |
-3.81 |
| P32618 |
EPSPKPSHK |
11.67
|
-3.03 |
-3.65 |
|
VPAKEPSPK |
12.81
|
-2.41 |
-3.03 |
|
TPSTSPSGR |
12.93
|
-4.04 |
-4.66 |
| Q03497 |
HKPKVKPSK |
7.21
|
-2.84 |
-3.46 |
|
SFPSKNPLK |
11.48
|
-3.39 |
-4.01 |
|
KSFPSKNPL |
12.30
|
-2.30 |
-2.92 |
| P39969 |
LPPQPGSKK |
10.87
|
-4.67 |
-5.29 |
|
LSPIPSPTR |
11.33
|
-3.84 |
-4.46 |
|
YPSPAQPPK |
11.44
|
-3.70 |
-4.32 |
| P22224 |
TPTFPNANG |
13.93
|
-2.28 |
-2.90 |
|
FPSTPGTID |
14.72
|
-2.07 |
-2.69 |
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