ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_2SRC-27.PDB
Scoring matrix: BBC1_2SRC-27_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAAA
Foldx wt ligand score: 11.52
Foldx random average score for Saccharomyces cerevisiae: 13.977

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3207542
Proteins after random average filtering: 7179
 Total fragments: 1998062
Proteins after disorder filtering: 4736
 Total fragments: 153018
Proteins after pattern filtering: 2316
 Total fragments: 23108
Proteins after MINT filtering: 32
 Total fragments: 1015

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AGAAAAAAA

11.52

-3.33

0.00

Best peptides

WKKRPEPRK

0.00

-1.60

1.73

         
Interactors      
Q06604

KGPRMPSRG

3.60

-7.44

-4.11

KPAPPVSRS

6.90

-6.44

-3.11

NKPKPTPPS

7.20

-4.42

-1.09

P24583

RANAPLPPQ

6.47

-7.38

-4.05

APLPPQPRK

7.38

-5.99

-2.66

ANAPLPPQP

9.90

-5.25

-1.92

Q06625

IPLPKDAPK

8.74

-5.61

-2.28

VGIPGTPRD

8.79

-4.85

-1.52

LTLPPIPLP

9.36

-6.22

-2.89

P19812

RPRRIPPTD

6.14

-4.52

-1.19

PRPRRIPPT

6.54

-3.25

0.08

APQNPPPIL

8.02

-5.52

-2.19

P53182

SRRNPGKPP

8.27

-7.11

-3.78

SSRRNPGKP

9.47

-2.01

1.32

P53169

YSPAQPSAS

9.67

-4.42

-1.09

IMPTLPPRP

10.27

-4.75

-1.42

VPIMPTLPP

10.33

-4.87

-1.54

P39521

QTPHVPDRP

7.64

-7.72

-4.39

VPDRPPSQL

8.25

-4.32

-0.99

QPKPKPAQD

9.74

-4.88

-1.55

P47068

TPPAPPAPP

7.50

-5.92

-2.59

NTAPPLPRA

7.50

-5.97

-2.64

PSSNPFFRK

7.62

-6.74

-3.41

Q12043

FNPSRFPMD

6.63

-5.85

-2.52

KTAAPGRFP

8.69

-6.68

-3.35

NPSRFPMDA

9.67

-3.50

-0.17

P40453

LRKRPPPPP

3.42

-6.80

-3.47

RKRPPPPPP

4.65

-7.72

-4.39

KRPPPPPPV

5.42

-7.66

-4.33

P53971

RKCHPGKCP

7.36

-6.55

-3.22

KVVNPDPNP

8.43

-5.20

-1.87

EKACPFLPS

8.67

-5.88

-2.55

Q12168

RGPPPLPPR

6.06

-6.82

-3.49

KVQHPVPKP

6.13

-7.15

-3.82

TNRGPPPLP

7.80

-5.56

-2.23

P27472

LSVPGSPRD

9.00

-5.98

-2.65

PGSPRDLRS

9.71

-6.78

-3.45

VPGSPRDLR

10.63

-5.21

-1.88

P36006

MGQPKDPKF

7.34

-5.63

-2.30

SNKKPKNPG

7.36

-4.80

-1.47

IPPPPPPMG

7.55

-7.11

-3.78

P32790

PPPAMPARP

7.05

-7.61

-4.28

KPPRPTSTT

7.82

-3.96

-0.63

SAPAPLDPF

9.04

-5.47

-2.14

Q06440

RTPKVEPSK

10.09

-2.40

0.93

DRTPKVEPS

11.51

-3.95

-0.62

KDRTPKVEP

13.48

-3.61

-0.28

Q06412

KERRPPPPP

4.16

-4.76

-1.43

RRPPPPPPL

5.19

-8.02

-4.69

VKERRPPPP

5.48

-4.85

-1.52

Q12216

RNPYGPNYN

7.23

-6.30

-2.97

YNRGPSTPL

8.48

-5.13

-1.80

AQRNPYGPN

8.91

-5.29

-1.96

P34226

VPVPPPQLH

10.45

-6.01

-2.68

TPTNSPSPG

10.88

-3.84

-0.51

DFVPVPPPQ

11.21

-4.45

-1.12

P36102

KYPRIYPPP

5.31

-5.59

-2.26

NLKYPRIYP

7.98

-5.93

-2.60

VPPPMQPPP

8.51

-6.27

-2.94

P53933

TRRRPPPPP

4.17

-4.72

-1.39

RRRPPPPPI

4.79

-7.72

-4.39

RTRRRPPPP

4.90

-5.97

-2.64

P40020

RVLPPLPFP

7.13

-6.65

-3.32

VNPHSIPFS

7.23

-5.35

-2.02

LPPYLSPQN

8.90

-6.74

-3.41

P53739

RRRSPSTPI

8.13

-6.57

-3.24

RRSPSTPIM

8.64

-4.52

-1.19

FPQEPSPKI

8.76

-4.38

-1.05

Q12446

RNNRPVPPP

4.09

-5.33

-2.00

RGPAPPPPP

4.65

-8.30

-4.97

KHKAPPPPP

5.39

-8.03

-4.70

P39969

PRRAPKPPS

6.36

-6.50

-3.17

VSPRRAPKP

7.58

-4.00

-0.67

RAPKPPSYP

7.86

-5.80

-2.47

Q04195

RAPPPTNPD

7.91

-6.36

-3.03

LPQNVPIRT

8.00

-8.43

-5.10

SSSHPSEPI

8.73

-6.54

-3.21

Q04439

KKPAPPPPG

4.20

-7.83

-4.50

SNARPSPPT

5.66

-3.77

-0.44

HSKKPAPPP

6.46

-5.72

-2.39

P40563

KRRAPPPVP

5.65

-6.92

-3.59

PSERPKRRA

7.63

-4.75

-1.42

RRAPPPVPK

7.83

-6.67

-3.34

P40325

SQPRPPPRP

4.41

-6.02

-2.69

HQSRPHQRP

5.88

-6.72

-3.39

RPPRPAANL

6.81

-5.10

-1.77

P37370

VSQMPKPRP

6.46

-6.40

-3.07

MPAPPPPPP

6.48

-7.31

-3.98

IPLAPLPPP

6.52

-7.24

-3.91

Q07555

WKTKVPKLP

8.44

-4.92

-1.59

TKVPKLPLP

8.96

-4.58

-1.25

KLPLPASRP

9.11

-5.44

-2.11

Q05080

RQKPDKPRP

6.06

-7.24

-3.91

LRQKPDKPR

7.40

-4.73

-1.40

KPDKPRPIV

8.05

-5.02

-1.69

 


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