ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_2SRC-11.PDB
Scoring matrix: BBC1_2SRC-11_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 12.5
Foldx random average score for Saccharomyces cerevisiae: 10.651

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3221900
Proteins after random average filtering: 7179
 Total fragments: 1488339
Proteins after disorder filtering: 4778
 Total fragments: 106127
Proteins after pattern filtering: 2315
 Total fragments: 15477
Proteins after MINT filtering: 32
 Total fragments: 785

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAA

12.50

-0.42

0.00

Best peptides

RPPYHRR

0.00

-3.59

-3.17

         
Interactors      
Q06604

KPLLPTR

4.79

-7.81

-7.39

GPRMPSR

5.01

-6.26

-5.84

PPPLPTR

5.59

-7.36

-6.94

P24583

LPPQPRK

4.15

-8.00

-7.58

APLPPQP

7.19

-6.12

-5.70

PLPPQPR

7.41

-3.76

-3.34

Q06625

LPPIPLP

6.00

-7.49

-7.07

IPGTPRD

7.08

-5.15

-4.73

PPIPLPK

8.26

-4.74

-4.32

P19812

SPIFRPG

6.75

-4.78

-4.36

HSPIFRP

6.84

-4.79

-4.37

PIFRPGN

7.02

-6.17

-5.75

P53182

RNPGKPP

8.97

-3.50

-3.08

RRNPGKP

10.63

-3.26

-2.84

P53169

MPTLPPR

4.58

-7.99

-7.57

VPIMPTL

5.54

-6.62

-6.20

PTLPPRP

7.24

-5.62

-5.20

P39521

PKPKPAQ

5.97

-6.08

-5.66

TPHVPDR

5.97

-5.90

-5.48

VPDRPPS

6.01

-6.46

-6.04

P47068

IPPVPPT

5.43

-6.72

-6.30

PPHVPSL

5.60

-6.23

-5.81

KVPPHPV

5.68

-2.46

-2.04

Q12043

NPSRFPM

4.37

-3.76

-3.34

APGRFPL

5.78

-3.89

-3.47

FPLQPLP

6.29

-6.00

-5.58

P40453

RPPPPPP

4.66

-8.17

-7.75

RKRPPPP

5.22

-7.85

-7.43

PPPLPPK

5.61

-8.46

-8.04

P53971

NPDPNPL

6.29

-4.40

-3.98

CPFLPSS

7.38

-5.22

-4.80

NPLDPNS

7.87

-3.61

-3.19

Q12168

PPPLPPR

4.70

-8.69

-8.27

PPPVPNR

4.73

-6.68

-6.26

PVPKPNI

6.26

-6.25

-5.83

P27472

RPLSVPG

8.07

-3.61

-3.19

PLSVPGS

8.23

-4.59

-4.17

VPGSPRD

8.50

-4.66

-4.24

P36006

PPPPPPM

5.03

-7.69

-7.27

NIPIPPP

5.27

-6.78

-6.36

IPPPPPP

5.29

-7.03

-6.61

P32790

PPIKPPR

3.81

-8.13

-7.71

PPAMPAR

4.36

-7.31

-6.89

KPPRPTS

5.31

-6.41

-5.99

Q06440

PKVEPSK

6.52

-5.46

-5.04

RTPKVEP

8.42

-4.43

-4.01

TPKVEPS

8.89

-3.46

-3.04

Q06412

RPPPPPP

4.66

-8.17

-7.75

PPPPPPL

5.27

-6.29

-5.87

PPPPPLL

5.90

-6.26

-5.84

Q12216

LPPIPPV

5.80

-7.28

-6.86

PKGSPTM

7.51

-4.33

-3.91

GPSTPLL

7.55

-4.40

-3.98

P34226

VPVPPPQ

6.28

-6.02

-5.60

PVPPPQL

6.64

-5.44

-5.02

FVPVPPP

7.01

-6.05

-5.63

P36102

PPMQPPP

5.44

-7.16

-6.74

PRIYPPP

6.39

-7.37

-6.95

PPPMQPP

6.64

-5.84

-5.42

P53933

RPPPPPI

4.07

-7.50

-7.08

PPPLPNR

5.45

-7.25

-6.83

PPPIPST

5.84

-6.85

-6.43

P40020

PPLPFPL

5.83

-3.39

-2.97

EPTSPTR

6.46

-5.02

-4.60

RVLPPLP

6.51

-6.33

-5.91

P53739

TPIMPSQ

6.24

-6.50

-6.08

SPSTPIM

7.13

-4.77

-4.35

SPASPPL

7.22

-4.26

-3.84

Q12446

PPPPPRR

3.99

-7.70

-7.28

APPPPPR

4.81

-6.50

-6.08

PPPPPHR

4.95

-7.18

-6.76

P39969

PPSYPSP

4.79

-7.28

-6.86

SPAQPPK

5.56

-6.41

-5.99

RAPKPPS

5.83

-6.56

-6.14

Q04195

PIQFPFP

6.25

-6.36

-5.94

EPIQFPF

6.37

-3.36

-2.94

PQNVPIR

6.71

-5.35

-4.93

Q04439

IPPPPPP

5.29

-7.03

-6.61

KPAPPPP

5.38

-6.94

-6.52

KKPAPPP

5.76

-6.68

-6.26

P40563

PPPVPKK

5.43

-8.07

-7.65

PSERPKR

5.67

-7.03

-6.61

TPNVPTR

6.31

-5.76

-5.34

P40325

QPPRPPR

4.15

-8.19

-7.77

RPHQRPS

4.70

-5.43

-5.01

RPPPRPQ

4.80

-4.55

-4.13

P37370

RPHMPSV

4.75

-7.14

-6.72

APPIPGM

4.93

-6.60

-6.18

IPDIPSS

5.44

-5.94

-5.52

Q07555

PASRPSL

6.83

-6.33

-5.91

KVPKLPL

6.93

-5.20

-4.78

VPKLPLP

7.25

-7.57

-7.15

Q05080

KPDKPRP

4.29

-8.39

-7.97

PDKPRPI

7.40

-2.40

-1.98

QKPDKPR

8.02

-2.40

-1.98

 


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