ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1ZUK3-7.PDB
Scoring matrix: BBC1_1ZUK3-7_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAA
Foldx wt ligand score: 16.72
Foldx random average score for Saccharomyces cerevisiae: 13.575

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 1464585
Proteins after disorder filtering: 4523
 Total fragments: 78242
Proteins after pattern filtering: 2148
 Total fragments: 13165
Proteins after MINT filtering: 32
 Total fragments: 643

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AGAAAAAA

16.72

-0.12

0.00

Best peptides

WMRKHYRR

0.00

-4.84

-4.72

         
Interactors      
Q06604

PPPLPTRR

6.16

-9.76

-9.64

PPSPPAKR

8.26

-6.58

-6.46

GPRMPSRG

8.97

-6.73

-6.61

P24583

LPPQPRKH

7.94

-5.91

-5.79

PLPPQPRK

9.14

-6.17

-6.05

PPQPRKHD

10.26

-4.68

-4.56

Q06625

LPPIPLPK

8.83

-4.48

-4.36

VLTLPPIP

9.76

-5.38

-5.26

PPIPLPKD

11.86

-4.18

-4.06

P19812

PRRIPPTD

10.39

-3.59

-3.47

EPRPRRIP

11.06

-4.09

-3.97

PRPRRIPP

11.26

-3.01

-2.89

P53182

SRRNPGKP

12.30

-3.87

-3.75

P53169

MPTLPPRP

8.68

-7.61

-7.49

VPIMPTLP

9.35

-6.53

-6.41

IMPTLPPR

9.47

-2.11

-1.99

P39521

VPDRPPSQ

9.21

-5.60

-5.48

AQPKPKPA

9.93

-3.43

-3.31

PKPKPAQD

10.67

-4.45

-4.33

P47068

PSSNPFFR

8.99

-6.28

-6.16

APSPPPHQ

9.87

-5.90

-5.78

VPPVPPVS

9.88

-4.66

-4.54

Q12043

APGRFPLQ

10.92

-5.21

-5.09

NPSRFPMD

11.24

-3.31

-3.19

FNPSRFPM

11.30

-1.11

-0.99

P40453

PPDLPIRL

8.48

-6.38

-6.26

PPPLPPKI

8.68

-6.05

-5.93

VPEPPSWK

9.05

-4.84

-4.72

P53971

PFLPSSLK

11.08

-3.82

-3.70

CPFLPSSL

11.23

-3.72

-3.60

EKACPFLP

11.49

-2.97

-2.85

Q12168

PPPLPPRA

7.95

-7.04

-6.92

DPYFPQFR

8.82

-6.79

-6.67

QHPVPKPN

10.30

-5.46

-5.34

P27472

PGSPRDLR

9.95

-3.99

-3.87

LSVPGSPR

12.97

-3.33

-3.21

VPGSPRDL

13.30

-2.53

-2.41

P36006

PPPPPPMG

8.72

-6.18

-6.06

KKPKNPGG

9.25

-3.82

-3.70

IPPPPPPM

9.76

-5.60

-5.48

P32790

LPPIKPPR

7.24

-3.95

-3.83

PPIKPPRP

8.28

-6.06

-5.94

PPAMPARP

9.49

-6.14

-6.02

Q06440

TPKVEPSK

12.85

-0.04

0.08

Q06412

NSPKSPRD

9.17

-4.17

-4.05

PPPPPPLL

9.67

-5.45

-5.33

PPPPPLLY

9.75

-5.86

-5.74

Q12216

LPPIPPVD

9.99

-3.46

-3.34

EGDLPPIP

11.41

-5.57

-5.45

QRNPYGPN

11.81

-1.78

-1.66

P34226

PVPPPQLH

10.06

-5.56

-5.44

VPVPPPQL

10.61

-4.68

-4.56

FVPVPPPQ

10.72

-4.90

-4.78

P36102

PRIYPPPH

9.20

-6.06

-5.94

PMQPPPIE

10.72

-4.79

-4.67

YDPFNAPI

11.53

-1.41

-1.29

P53933

PPPLPNRQ

8.17

-8.14

-8.02

YPGNPTSR

10.55

-4.50

-4.38

VAPPPLPN

10.59

-3.74

-3.62

P40020

LPPLPFPL

9.19

-4.40

-4.28

EPTSPTRQ

10.17

-6.42

-6.30

LTPESPLN

10.65

-2.32

-2.20

P53739

TPIMPSQN

10.63

-4.68

-4.56

FPQEPSPK

11.19

-3.51

-3.39

PQEPSPKI

11.38

-3.27

-3.15

Q12446

VPPPPPMR

5.69

-7.93

-7.81

APPPPPRR

6.91

-8.55

-8.43

PPPPPHRH

7.45

-7.42

-7.30

P39969

QPPKSPLL

8.10

-4.41

-4.29

VSPRRAPK

9.24

-3.42

-3.30

PIPSPTRN

10.12

-5.52

-5.40

Q04195

PQNVPIRT

11.12

-4.92

-4.80

TPVLPTLP

11.32

-4.14

-4.02

LPTLPQNV

11.59

-3.54

-3.42

Q04439

IPTPPQNR

9.58

-6.20

-6.08

APPPPGMQ

9.79

-5.63

-5.51

SKPKEPMF

10.22

-2.52

-2.40

P40563

PSERPKRR

6.52

-8.55

-8.43

PPPVPKKP

9.94

-5.04

-4.92

TPKVPERP

10.84

-4.75

-4.63

P40325

PWTYPPRF

8.99

-6.07

-5.95

QPPRPPRP

9.03

-6.34

-6.22

NPSLPWTY

9.60

-4.21

-4.09

P37370

QMPKPRPF

8.06

-4.57

-4.45

MPKPRPFQ

8.40

-5.99

-5.87

APPIPGMG

8.65

-5.64

-5.52

Q07555

VPKLPLPA

9.68

-4.61

-4.49

KVPKLPLP

9.84

-3.38

-3.26

PASRPSLN

10.13

-5.79

-5.67

Q05080

KPDKPRPI

8.64

-4.03

-3.91

LRQKPDKP

9.18

-4.23

-4.11

PDKPRPIV

10.81

-3.40

-3.28

 


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