ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1ZUK3-3.PDB
Scoring matrix: BBC1_1ZUK3-3_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 24.02
Foldx random average score for Saccharomyces cerevisiae: 22.396

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7179
 Total fragments: 1483182
Proteins after disorder filtering: 4434
 Total fragments: 79592
Proteins after pattern filtering: 2081
 Total fragments: 10726
Proteins after MINT filtering: 32
 Total fragments: 443

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

24.02

-0.48

0.00

Best peptides

RRRWRRRPRW

0.00

-7.39

-6.90

         
Interactors      
Q06604

MKNKPKPTPP

11.23

-8.47

-7.99

TMKNKPKPTP

14.92

-10.91

-10.43

EKGPRMPSRG

15.52

-5.42

-4.93

P24583

AERANAPLPP

18.05

-7.23

-6.75

ANAPLPPQPR

18.06

-7.12

-6.63

ERANAPLPPQ

18.43

-8.61

-8.13

Q06625

VLTLPPIPLP

15.59

-8.98

-8.50

GVLTLPPIPL

17.69

-8.19

-7.70

GSVGIPGTPR

18.77

-6.44

-5.96

P19812

PRRIPPTDED

15.68

-10.70

-10.22

PQNPPPILQF

16.36

-7.81

-7.32

RPRRIPPTDE

20.15

-12.28

-11.80

P53182

SSRRNPGKPP

12.67

-14.05

-13.57

KSSRRNPGKP

16.27

-9.43

-8.95

P53169

NSVPIMPTLP

19.10

-7.51

-7.02

IMPTLPPRPY

19.61

-7.26

-6.77

TANSVPIMPT

21.27

-5.23

-4.75

P39521

VQTPHVPDRP

16.46

-6.93

-6.44

AQPKPKPAQD

19.89

-6.66

-6.17

HVPDRPPSQL

20.31

-7.78

-7.29

P47068

SRTLPPHVPS

15.79

-7.59

-7.10

HSHTAPSPPP

17.36

-8.26

-7.77

RTLPPHVPSL

17.73

-6.50

-6.01

Q12043

NTLFNPSRFP

15.25

-8.10

-7.61

NKTAAPGRFP

16.95

-7.43

-6.94

SLPGVFPSTP

18.32

-6.43

-5.94

P40453

IRLRKRPPPP

6.99

-11.03

-10.55

RLRKRPPPPP

7.69

-13.44

-12.96

LRKRPPPPPP

10.51

-14.41

-13.93

P53971

QRKCHPGKCP

14.10

-10.48

-10.00

GKVVNPDPNP

16.70

-4.22

-3.73

RKCHPGKCPP

16.92

-7.13

-6.64

Q12168

NKVQHPVPKP

13.72

-9.57

-9.09

TNRGPPPLPP

14.05

-10.14

-9.66

NRGPPPLPPR

14.73

-9.76

-9.28

P27472

SVPGSPRDLR

19.65

-8.42

-7.93

PLSVPGSPRD

22.28

-3.62

-3.14

P36006

SKSNKKPKNP

13.73

-7.60

-7.11

KSNKKPKNPG

14.13

-7.84

-7.35

SNKKPKNPGG

16.37

-8.19

-7.70

P32790

SSAPAPLDPF

18.69

-6.93

-6.44

VSSAPAPLDP

20.24

-6.04

-5.55

PIKPPRPTST

21.75

-4.93

-4.44

Q06440

KKDRTPKVEP

13.86

-7.84

-7.35

DRTPKVEPSK

19.71

-5.78

-5.29

KDRTPKVEPS

20.61

-3.31

-2.83

Q06412

VKERRPPPPP

11.17

-9.72

-9.24

ERRPPPPPPL

13.33

-8.88

-8.40

YVKERRPPPP

13.44

-5.15

-4.67

Q12216

AQRNPYGPNY

15.69

-3.94

-3.46

YNRGPSTPLL

17.00

-6.43

-5.94

NHTSTPKGSP

18.70

-7.32

-6.84

P34226

SLGSTPTNSP

17.03

-8.24

-7.75

EEDFVPVPPP

21.00

1.45

1.94

PTNSPSPGAL

21.48

-4.80

-4.31

P36102

NLKYPRIYPP

11.44

-9.06

-8.58

SNLKYPRIYP

13.59

-10.82

-10.34

ANNVPPPMQP

15.99

-8.84

-8.36

P53933

VRTRRRPPPP

7.90

-12.10

-11.62

RTRRRPPPPP

9.16

-14.90

-14.42

TRRRPPPPPI

10.06

-13.18

-12.70

P40020

KSRVLPPLPF

13.27

-9.53

-9.04

SRVLPPLPFP

14.05

-11.16

-10.68

NLYLTPESPL

16.69

-8.21

-7.73

P53739

GRRRSPSTPI

11.89

-13.11

-12.63

RRRSPSTPIM

14.10

-10.17

-9.69

TGRRRSPSTP

16.91

-7.37

-6.88

Q12446

NRNNRPVPPP

10.98

-12.25

-11.77

GRRGPAPPPP

11.09

-12.82

-12.34

PRRGPAPPPP

12.11

-10.69

-10.21

P39969

PRRAPKPPSY

12.60

-11.78

-11.30

RRAPKPPSYP

12.74

-11.77

-11.29

GKALSPIPSP

15.72

-4.73

-4.25

Q04195

SRGNEPIQFP

14.95

-11.08

-10.60

RQNSTPVLPT

15.92

-7.84

-7.35

SRAPPPTNPD

17.01

-7.38

-6.89

Q04439

SRHSKKPAPP

11.19

-11.35

-10.87

RHSKKPAPPP

13.65

-9.32

-8.84

SQSNARPSPP

13.72

-7.78

-7.29

P40563

KRRAPPPVPK

10.45

-12.28

-11.80

PKRRAPPPVP

13.48

-11.61

-11.13

RRAPPPVPKK

13.67

-9.52

-9.04

P40325

SRPHQRPSTM

15.20

-8.13

-7.65

SLPWTYPPRF

15.48

-7.42

-6.93

SSQPRPPPRP

15.78

-9.12

-8.63

P37370

SNLEKPPSPP

14.05

-8.92

-8.44

SQMPKPRPFQ

14.22

-9.33

-8.85

SKNPTKSPPP

14.76

-7.15

-6.67

Q07555

WKTKVPKLPL

13.74

-8.77

-8.29

SWKTKVPKLP

14.41

-10.17

-9.69

KTKVPKLPLP

16.10

-8.68

-8.20

Q05080

RQKPDKPRPI

13.89

-7.91

-7.42

LRQKPDKPRP

16.43

-11.17

-10.69

QKPDKPRPIV

22.06

-8.31

-7.83

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER