ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1ZUK3-23.PDB
Scoring matrix: BBC1_1ZUK3-23_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 12.95
Foldx random average score for Saccharomyces cerevisiae: 12.659

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3221900
Proteins after random average filtering: 7179
 Total fragments: 1715456
Proteins after disorder filtering: 4939
 Total fragments: 134784
Proteins after pattern filtering: 2299
 Total fragments: 15404
Proteins after MINT filtering: 32
 Total fragments: 764

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAA

12.95

-2.29

0.00

Best peptides

MKLRPRM

0.00

-4.58

-2.29

         
Interactors      
Q06604

PPLPTRR

6.30

-2.73

-0.44

PLLPTRP

6.80

-3.00

-0.71

LPTRPNK

7.28

-4.47

-2.18

P24583

LPPQPRK

5.82

-3.23

-0.94

APLPPQP

7.91

-2.79

-0.50

PLPPQPR

10.86

-1.38

0.91

Q06625

LTLPPIP

6.68

-3.71

-1.42

TLPPIPL

8.75

-1.26

1.03

LPKDAPK

9.54

-0.96

1.33

P19812

RPRRIPP

5.19

-6.07

-3.78

PRPRRIP

8.89

-3.34

-1.05

PIFRPGN

10.58

-1.53

0.76

P53182

RRNPGKP

8.56

-5.83

-3.54

RNPGKPP

9.82

-5.08

-2.79

P53169

PTLPPRP

6.59

-3.41

-1.12

TLPPRPY

9.43

-1.06

1.23

NSVPIMP

9.93

-2.38

-0.09

P39521

PKPKPAQ

9.24

-2.43

-0.14

PHVPDRP

9.25

-1.96

0.33

PDRPPSQ

9.55

-2.06

0.23

P47068

LPRAPPV

7.55

-3.80

-1.51

RAPPVPP

8.14

-4.12

-1.83

PPLPRAP

8.27

-3.09

-0.80

Q12043

FPLQPLP

6.39

-5.35

-3.06

NPSRFPM

8.09

-3.08

-0.79

QPLPSPS

8.69

-2.53

-0.24

P40453

RKRPPPP

5.21

-5.07

-2.78

PDLPIRL

6.43

-2.61

-0.32

RPPPPPP

7.14

-4.68

-2.39

P53971

PFLPSSL

8.55

-2.57

-0.28

KACPFLP

8.55

-3.01

-0.72

NPDPNPL

9.21

-0.94

1.35

Q12168

PPLPPRA

6.88

-2.17

0.12

RGPPPLP

7.32

-4.02

-1.73

PPVPNRP

8.98

-2.02

0.27

P27472

RPLSVPG

7.98

-6.13

-3.84

LSVPGSP

10.19

-2.14

0.15

PGSPRDL

10.52

-1.99

0.30

P36006

PPPPPPM

8.35

-2.29

-0.00

MGQPKDP

8.52

-2.46

-0.17

KKPKNPG

8.73

-3.38

-1.09

P32790

PIKPPRP

7.89

-2.02

0.27

MPARPTA

8.04

-2.98

-0.69

APLDPFK

8.16

-1.34

0.95

Q06440

RTPKVEP

7.92

-6.03

-3.74

PKVEPSK

9.96

-1.20

1.09

Q06412

RPPPPPP

7.14

-4.68

-2.39

RRPPPPP

7.35

-5.39

-3.10

TKPPPPL

7.48

-1.78

0.51

Q12216

GDLPPIP

8.50

-3.20

-0.91

RGPSTPL

8.66

-5.62

-3.33

PKGSPTM

10.55

-3.01

-0.72

P34226

PVPPPQL

9.98

-1.30

0.99

TPTNSPS

10.78

-0.24

2.05

VPVPPPQ

11.66

-0.58

1.71

P36102

KYPRIYP

7.37

-4.41

-2.12

PPMQPPP

9.71

-4.22

-1.93

PMQPPPI

10.40

-1.10

1.19

P53933

RRRPPPP

5.82

-5.05

-2.76

PPLPNRQ

6.73

-2.31

-0.02

RPPPPPI

6.78

-3.29

-1.00

P40020

RVLPPLP

5.36

-6.26

-3.97

MSLPVTP

6.43

-4.63

-2.34

PPLPFPL

7.54

-3.04

-0.75

P53739

RSPSTPI

8.94

-5.44

-3.15

RRSPSTP

8.99

-4.42

-2.13

PPLSPTI

9.19

-3.36

-1.07

Q12446

RPLPQLP

5.40

-6.36

-4.07

HSLPPLP

6.91

-4.33

-2.04

RPVPPPP

7.58

-4.64

-2.35

P39969

KLLPPQP

6.44

-3.91

-1.62

SPRRAPK

7.41

-2.39

-0.10

QPPKSPL

8.03

-3.62

-1.33

Q04195

PVLPTLP

8.55

-3.48

-1.19

HPSEPII

8.93

-2.79

-0.50

LPQNVPI

9.25

-1.34

0.95

Q04439

KPKEPMF

6.62

-3.63

-1.34

SKPKEPM

7.58

-3.11

-0.82

KKPAPPP

7.67

-4.63

-2.34

P40563

PKVPERP

8.20

-1.27

1.02

RAPPPVP

8.43

-4.16

-1.87

APPPVPK

9.63

-1.56

0.73

P40325

PPRPPRP

6.27

-1.94

0.35

RPPPRPQ

7.37

-3.77

-1.48

QPRPPPR

7.38

-2.09

0.20

P37370

MPKPRPF

6.25

-3.79

-1.50

QMPKPRP

6.78

-3.58

-1.29

MPAPPPP

7.12

-3.29

-1.00

Q07555

KVPKLPL

7.47

-4.19

-1.90

TKVPKLP

8.54

-2.06

0.23

PKLPLPA

8.93

-2.35

-0.06

Q05080

KPDKPRP

4.78

-4.30

-2.01

RQKPDKP

7.99

-4.57

-2.28

PDKPRPI

9.94

-1.81

0.48

 


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