ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1ZUK3-18.PDB
Scoring matrix: BBC1_1ZUK3-18_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAAA
Foldx wt ligand score: 18.89
Foldx random average score for Saccharomyces cerevisiae: 19.415

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7179
 Total fragments: 1605646
Proteins after disorder filtering: 4591
 Total fragments: 105387
Proteins after pattern filtering: 2117
 Total fragments: 11062
Proteins after MINT filtering: 31
 Total fragments: 379

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAAA

18.89

3.18

0.00

Best peptides

FPPITSIKGK

0.00

-3.03

-6.21

         
Interactors      
Q06604

KGPRMPSRGR

10.17

-4.81

-7.99

KPLLPTRPNK

11.39

-3.20

-6.38

LLPTRPNKAE

11.63

-2.15

-5.33

P24583

LPPQPRKHDK

13.51

-3.13

-6.31

APLPPQPRKH

15.46

-3.09

-6.27

NAPLPPQPRK

16.42

-2.40

-5.58

Q06625

LPPIPLPKDA

13.42

-3.30

-6.48

GIPGTPRDGA

17.86

0.01

-3.17

LDDGGPKQGP

18.29

-1.97

-5.15

P19812

HSPIFRPGNI

14.95

-1.98

-5.16

TSPSNSPEAS

15.97

1.93

-1.25

RPRRIPPTDE

16.19

-2.25

-5.43

P53169

YSPAQPSASL

19.07

1.32

-1.86

P39521

PKPKPAQDND

16.41

0.93

-2.25

PDRPPSQLSA

17.51

-0.57

-3.75

DAQPKPKPAQ

18.81

0.70

-2.48

P47068

PPHVPSLTNR

10.80

-2.23

-5.41

DPSSNPFFRK

13.94

-2.80

-5.98

VPPVPPVSSA

14.39

-0.20

-3.38

Q12043

LQPLPSPSST

12.09

-1.52

-4.70

SPSTSPQRSK

12.41

-2.35

-5.53

FPSTPLFEKD

13.80

-2.81

-5.99

P40453

PPDLPIRLRK

13.65

-5.41

-8.59

RPPPPPPVSM

14.23

-3.56

-6.74

DCPRCGPTAS

14.30

0.15

-3.03

P53971

CPFLPSSLKT

12.62

-2.08

-5.26

NPLDPNSCGQ

14.27

-1.32

-4.50

EKACPFLPSS

17.45

2.26

-0.92

Q12168

PPPVPNRPGG

12.42

-2.55

-5.73

PPPLPPRANV

12.80

-1.66

-4.84

PPVPNRPGGT

14.50

-2.16

-5.34

P27472

VPGSPRDLRS

17.38

-2.92

-6.10

PLSVPGSPRD

17.81

-2.19

-5.37

LSVPGSPRDL

18.28

1.19

-1.99

P36006

IPPPPPPMGQ

11.61

-3.86

-7.04

PKNPGGLSGK

12.78

-1.23

-4.41

KPKNPGGLSG

13.21

-1.29

-4.47

P32790

APLDPFKTGG

13.16

-1.82

-5.00

PPRPTSTTSV

15.00

-0.56

-3.74

PLDPFKTGGN

16.06

-1.56

-4.74

Q06440

DRTPKVEPSK

18.88

0.55

-2.63

Q06412

KPPPPLSTSR

14.66

-2.86

-6.04

PMVSPSSQSR

14.79

-1.08

-4.26

SPKSPRDSSK

15.50

-0.58

-3.76

Q12216

RNPYGPNYNT

12.91

-0.32

-3.50

QRNPYGPNYN

16.94

-1.60

-4.78

AQRNPYGPNY

17.17

3.20

0.02

P34226

TPTNSPSPGA

14.16

-1.38

-4.56

VPVPPPQLHL

16.88

-3.38

-6.56

PTNSPSPGAL

17.52

1.57

-1.61

P36102

YDPFNAPIFT

15.24

-3.35

-6.53

PMQPPPIESS

17.44

1.53

-1.65

PIFTPSSTSS

17.54

0.21

-2.97

P53933

RPPPPPIPST

14.23

-0.92

-4.10

RVAPPPLPNR

16.16

0.56

-2.62

PPPIPSTQKP

16.67

0.58

-2.60

P40020

LPPYLSPQNK

9.34

-2.40

-5.58

PPPLTPEKNL

10.12

-1.30

-4.48

YLTPESPLNR

11.46

-3.70

-6.88

P53739

TPIMPSQNSN

13.04

-3.07

-6.25

STPIMPSQNS

16.37

-1.57

-4.75

FFPQEPSPKI

16.62

0.91

-2.27

Q12446

LPQLPNRNNR

8.85

-6.02

-9.20

IPEIPSTQSA

12.22

-2.94

-6.12

LPPLPNQFAP

12.52

-4.54

-7.72

P39969

FKLLPPQPGS

9.73

-3.77

-6.95

PPQPGSKKGL

11.67

-3.35

-6.53

QPPKSPLLNN

11.96

-4.82

-8.00

Q04195

HPSEPIIINL

14.41

0.94

-2.24

PQNVPIRTNS

15.74

-1.80

-4.98

APPPTNPDAS

16.19

0.69

-2.49

Q04439

APPPPGMQNK

11.85

-0.81

-3.99

KKPAPPPPGM

13.54

-2.68

-5.86

KPKEPMFEAA

13.77

-0.49

-3.67

P40563

MEVNSQPQGP

15.26

-1.98

-5.16

RRAPPPVPKK

15.59

0.76

-2.42

PPTPAGTPNV

16.95

1.62

-1.56

P40325

LPWTYPPRFY

12.27

-5.37

-8.55

QPPRPPRPAA

13.30

-2.93

-6.11

QPGDPRLGGV

13.81

-2.54

-5.72

P37370

MPKPRPFQNK

11.21

-2.12

-5.30

PPPPTPTIGL

12.36

-3.15

-6.33

PPPPTLTTNK

13.06

-3.25

-6.43

Q07555

VPKLPLPASR

12.60

-2.40

-5.58

LPASRPSLNL

12.82

-0.61

-3.79

LSPQKVPTGT

13.39

-1.90

-5.08

Q05080

PDKPRPIVGE

15.00

-1.39

-4.57

KPDKPRPIVG

18.52

0.42

-2.76

 


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