ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1ZUK3-12.PDB
Scoring matrix: BBC1_1ZUK3-12_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 15.64
Foldx random average score for Saccharomyces cerevisiae: 12.788

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 1273116
Proteins after disorder filtering: 4502
 Total fragments: 67822
Proteins after pattern filtering: 2084
 Total fragments: 10838
Proteins after MINT filtering: 32
 Total fragments: 557

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

15.64

-0.43

0.00

Best peptides

RWWRRRTK

0.00

-7.98

-7.55

         
Interactors      
Q06604

KGPRMPSR

7.08

-4.11

-3.68

FEKGPRMP

7.31

-6.06

-5.63

PRMPSRGR

7.34

-7.19

-6.76

P24583

LPPQPRKH

8.89

-4.92

-4.49

PLPPQPRK

10.80

-4.29

-3.86

NAPLPPQP

11.44

-4.23

-3.80

Q06625

PKQGPVTV

11.11

-2.09

-1.66

LPPIPLPK

11.35

-4.22

-3.79

LTLPPIPL

11.40

-4.62

-4.19

P19812

PRPRRIPP

7.12

-6.17

-5.74

HSPIFRPG

8.43

-4.09

-3.66

RPRRIPPT

9.03

-6.12

-5.69

P53182

RRNPGKPP

11.95

-3.87

-3.44

SRRNPGKP

12.16

-2.85

-2.42

P53169

PTLPPRPY

8.49

-5.86

-5.43

PIMPTLPP

10.16

-5.99

-5.56

SVPIMPTL

11.26

-2.92

-2.49

P39521

PHVPDRPP

7.88

-6.49

-6.06

AQPKPKPA

10.56

-3.91

-3.48

VPDRPPSQ

10.76

-4.34

-3.91

P47068

PLPRAPPV

8.53

-5.27

-4.84

APPLPRAP

9.36

-5.59

-5.16

PHVPSLTN

9.62

-5.73

-5.30

Q12043

LFNPSRFP

10.00

-5.73

-5.30

TAAPGRFP

10.48

-4.64

-4.21

PGRFPLQP

10.55

-4.95

-4.52

P40453

LRKRPPPP

7.39

-6.82

-6.39

PDLPIRLR

8.79

-6.73

-6.30

PEPPSWKP

10.34

-5.67

-5.24

P53971

KCHPGKCP

11.58

-4.18

-3.75

ACPFLPSS

11.75

-3.66

-3.23

CPFLPSSL

11.85

-2.92

-2.49

Q12168

PYFPQFRS

8.94

-7.34

-6.91

PPVPNRPG

9.15

-4.74

-4.31

PPLPPRAN

10.07

-5.91

-5.48

P27472

SVPGSPRD

11.45

-4.20

-3.77

LSVPGSPR

11.86

-3.86

-3.43

P36006

SNKKPKNP

10.53

-4.75

-4.32

GQPKDPKF

11.23

-4.14

-3.71

PIPPPPPP

11.35

-3.94

-3.51

P32790

PIKPPRPT

7.09

-4.47

-4.04

PAMPARPT

7.61

-5.90

-5.47

KPPRPTST

8.73

-6.02

-5.59

Q06440

TPKVEPSK

11.45

-2.49

-2.06

RTPKVEPS

12.75

-1.85

-1.42

Q06412

KERRPPPP

7.83

-6.07

-5.64

SPKSPRDS

10.54

-4.32

-3.89

FTKPPPPL

10.55

-3.77

-3.34

Q12216

AQRNPYGP

10.30

-4.13

-3.70

TPKGSPTM

11.38

-3.25

-2.82

GDLPPIPP

11.54

-5.25

-4.82

P34226

EDFVPVPP

10.91

-3.28

-2.85

DFVPVPPP

11.42

-4.80

-4.37

VPVPPPQL

11.72

-4.99

-4.56

P36102

KYPRIYPP

6.47

-4.09

-3.66

LKYPRIYP

10.57

-5.38

-4.95

NVPPPMQP

10.84

-5.42

-4.99

P53933

TRRRPPPP

7.80

-6.16

-5.73

PPLPNRQL

9.80

-7.10

-6.67

VAPPPLPN

10.85

-3.11

-2.68

P40020

DRPPPLTP

9.70

-4.25

-3.82

SLPPYLSP

10.11

-4.35

-3.92

PTSPTRQV

10.20

-4.86

-4.43

P53739

FFPQEPSP

11.28

-3.06

-2.63

STPIMPSQ

11.36

-3.23

-2.80

PIMPSQNS

11.71

-4.65

-4.22

Q12446

PPPPMRTT

8.39

-5.66

-5.23

PPPPPRRG

8.44

-6.69

-6.26

PPPPHRHV

8.82

-6.73

-6.30

P39969

VSPRRAPK

8.06

-4.77

-4.34

SPRRAPKP

8.41

-7.86

-7.43

PKPPSYPS

10.18

-5.22

-4.79

Q04195

NEPIQFPF

11.20

-3.74

-3.31

NSVPNPPN

11.46

-4.40

-3.97

STPVLPTL

11.60

-3.05

-2.62

Q04439

SNARPSPP

10.95

-3.59

-3.16

SKKPAPPP

11.11

-3.84

-3.41

NIPPPPPP

11.24

-3.05

-2.62

P40563

PSERPKRR

7.40

-7.85

-7.42

GTPNVPTR

10.30

-3.51

-3.08

RAPPPVPK

10.39

-3.89

-3.46

P40325

SQPRPPPR

7.72

-6.91

-6.48

PRPPPRPQ

8.02

-5.39

-4.96

QSQPPRPP

8.16

-4.00

-3.57

P37370

PKPRPFQN

6.68

-7.93

-7.50

QMPKPRPF

7.33

-4.64

-4.21

PQNRPHMP

8.48

-5.77

-5.34

Q07555

PLPASRPS

8.77

-3.51

-3.08

TKVPKLPL

10.09

-5.34

-4.91

KTKVPKLP

10.44

-2.69

-2.26

Q05080

RQKPDKPR

9.23

-3.91

-3.48

KPDKPRPI

11.18

-2.96

-2.53

PDKPRPIV

11.61

-3.43

-3.00

 


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