ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1ZUK3-1.PDB
Scoring matrix: BBC1_1ZUK3-1_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 20.21
Foldx random average score for Saccharomyces cerevisiae: 20.200

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7179
 Total fragments: 1563923
Proteins after disorder filtering: 4490
 Total fragments: 89994
Proteins after pattern filtering: 2198
 Total fragments: 14770
Proteins after MINT filtering: 32
 Total fragments: 673

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

20.21

-4.04

0.00

Best peptides

HMRFRRRRRW

0.00

-10.47

-6.43

         
Interactors      
Q06604

MKNKPKPTPP

10.98

-9.87

-5.83

TMKNKPKPTP

13.00

-9.71

-5.67

SSPPPLPTRR

13.50

-9.51

-5.47

P24583

RANAPLPPQP

13.08

-10.17

-6.13

NAPLPPQPRK

13.32

-8.73

-4.69

ANAPLPPQPR

13.85

-10.26

-6.22

Q06625

KGVLTLPPIP

12.65

-9.97

-5.93

VLTLPPIPLP

18.08

-12.35

-8.31

GSVGIPGTPR

18.41

-6.36

-2.32

P19812

HSPIFRPGNI

10.49

-6.60

-2.56

PQNPPPILQF

14.65

-7.41

-3.37

NGDDDAPQNP

14.96

-5.70

-1.66

P53182

KSSRRNPGKP

14.97

-11.18

-7.14

SSRRNPGKPP

15.40

-13.21

-9.17

P53169

IMPTLPPRPY

12.57

-7.43

-3.39

NSVPIMPTLP

17.67

-7.99

-3.95

TANSVPIMPT

18.24

-6.96

-2.92

P39521

AQPKPKPAQD

13.27

-8.77

-4.73

VQTPHVPDRP

15.82

-8.20

-4.16

HVPDRPPSQL

16.02

-10.93

-6.89

P47068

HSHTAPSPPP

13.03

-10.99

-6.95

SRTLPPHVPS

13.29

-9.09

-5.05

TAPPLPRAPP

13.96

-9.89

-5.85

Q12043

FNPSRFPMDA

12.24

-9.89

-5.85

AAPGRFPLQP

13.45

-10.33

-6.29

NKTAAPGRFP

14.30

-8.03

-3.99

P40453

RLRKRPPPPP

10.82

-13.40

-9.36

RKRPPPPPPV

11.31

-11.76

-7.72

WKPPDLPIRL

13.08

-5.28

-1.24

P53971

RKCHPGKCPP

11.38

-10.07

-6.03

QRKCHPGKCP

12.66

-10.58

-6.54

GKVVNPDPNP

15.01

-10.76

-6.72

Q12168

NKVQHPVPKP

10.89

-9.64

-5.60

NRGPPPLPPR

12.83

-7.66

-3.62

RGPPPLPPRA

13.46

-8.25

-4.21

P27472

LSVPGSPRDL

18.72

-6.95

-2.91

SVPGSPRDLR

20.02

-11.55

-7.51

P36006

SKSNKKPKNP

10.44

-10.98

-6.94

KSNKKPKNPG

11.96

-9.17

-5.13

PMGQPKDPKF

13.12

-6.77

-2.73

P32790

SSAPAPLDPF

14.13

-9.17

-5.13

VSSAPAPLDP

17.12

-8.61

-4.57

SAPAPLDPFK

17.30

-6.46

-2.42

Q06440

KKDRTPKVEP

11.88

-11.18

-7.14

KDRTPKVEPS

17.04

-3.40

0.64

DRTPKVEPSK

19.86

-3.17

0.87

Q06412

RRPPPPPPLL

12.67

-7.50

-3.46

VKERRPPPPP

12.68

-13.30

-9.26

FSPNSPKSPR

13.07

-8.74

-4.70

Q12216

AQRNPYGPNY

12.83

-9.91

-5.87

RNPYGPNYNT

14.41

-6.87

-2.83

NHTSTPKGSP

15.74

-6.86

-2.82

P34226

QEEDFVPVPP

16.87

-5.95

-1.91

EEDFVPVPPP

17.80

-3.80

0.24

FVPVPPPQLH

18.65

-10.59

-6.55

P36102

SNLKYPRIYP

11.46

-12.93

-8.89

ANNVPPPMQP

12.30

-12.96

-8.92

NLKYPRIYPP

13.15

-7.31

-3.27

P53933

RRRPPPPPIP

9.76

-13.27

-9.23

VRTRRRPPPP

11.80

-16.18

-12.14

AKRVAPPPLP

12.58

-12.68

-8.64

P40020

RNCVNPHSIP

10.70

-11.75

-7.71

KSRVLPPLPF

11.09

-10.57

-6.53

KKSRVLPPLP

12.43

-11.00

-6.96

P53739

RRRSPSTPIM

13.06

-10.28

-6.24

RRSPSTPIMP

15.24

-9.62

-5.58

GRRRSPSTPI

15.24

-14.70

-10.66

Q12446

NRNNRPVPPP

10.92

-9.97

-5.93

NRPVPPPPPM

11.00

-10.09

-6.05

HSLPPLPNQF

11.09

-10.40

-6.36

P39969

RRAPKPPSYP

11.37

-8.43

-4.39

YCFKLLPPQP

13.26

-9.66

-5.62

PRRAPKPPSY

13.79

-10.79

-6.75

Q04195

RQNSTPVLPT

14.10

-8.06

-4.02

HCSSSHPSEP

14.45

-10.82

-6.78

CSSSHPSEPI

14.99

-6.61

-2.57

Q04439

SRHSKKPAPP

10.42

-11.94

-7.90

HSKKPAPPPP

10.97

-11.12

-7.08

RQANIPPPPP

11.83

-12.40

-8.36

P40563

RRAPPPVPKK

11.20

-9.16

-5.12

KRRAPPPVPK

11.68

-12.87

-8.83

PSERPKRRAP

12.80

-9.21

-5.17

P40325

QSQPPRPPRP

11.46

-9.30

-5.26

SSQPRPPPRP

11.66

-12.24

-8.20

SQPPRPPRPA

12.08

-7.11

-3.07

P37370

QMPKPRPFQN

10.94

-6.32

-2.28

VSQMPKPRPF

11.56

-10.93

-6.89

SQMPKPRPFQ

11.99

-9.31

-5.27

Q07555

WKTKVPKLPL

11.15

-9.55

-5.51

TKVPKLPLPA

14.25

-6.67

-2.63

PKLPLPASRP

15.03

-8.57

-4.53

Q05080

QKPDKPRPIV

7.91

-11.44

-7.40

RQKPDKPRPI

10.61

-7.59

-3.55

LRQKPDKPRP

16.01

-11.45

-7.41

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER