ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1ZUK2-7.PDB
Scoring matrix: BBC1_1ZUK2-7_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAA
Foldx wt ligand score: 17.36
Foldx random average score for Saccharomyces cerevisiae: 14.703

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 1299900
Proteins after disorder filtering: 4513
 Total fragments: 69862
Proteins after pattern filtering: 2099
 Total fragments: 11777
Proteins after MINT filtering: 32
 Total fragments: 583

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AGAAAAAA

17.36

-0.79

0.00

Best peptides

WHRIHYKR

0.00

-4.00

-3.21

         
Interactors      
Q06604

PPSPPAKR

7.01

-6.34

-5.55

PPPLPTRR

8.07

-8.75

-7.96

KPAPPVSR

10.13

-4.94

-4.15

P24583

PLPPQPRK

8.69

-5.71

-4.92

APLPPQPR

11.16

-4.84

-4.05

PPQPRKHD

11.55

-4.03

-3.24

Q06625

PPIPLPKD

10.75

-4.27

-3.48

VGIPGTPR

11.77

-3.89

-3.10

VLTLPPIP

12.85

-5.88

-5.09

P19812

PRRIPPTD

11.63

-4.11

-3.32

PQNPPPIL

12.22

-4.57

-3.78

EPRPRRIP

12.36

-5.29

-4.50

P53182

SRRNPGKP

11.95

-3.29

-2.50

RRNPGKPP

13.39

-2.78

-1.99

P53169

IMPTLPPR

9.31

-5.32

-4.53

MPTLPPRP

11.70

-6.46

-5.67

VPIMPTLP

13.08

-5.04

-4.25

P39521

VPDRPPSQ

10.03

-5.33

-4.54

QPKPKPAQ

11.37

-3.69

-2.90

TPHVPDRP

12.16

-4.86

-4.07

P47068

APSPPPHQ

9.74

-5.96

-5.17

PSSNPFFR

9.86

-6.25

-5.46

TAPPLPRA

11.17

-4.70

-3.91

Q12043

APGRFPLQ

10.25

-4.45

-3.66

NPSRFPMD

12.12

-3.23

-2.44

SPSTSPQR

12.55

-4.33

-3.54

P40453

VPEPPSWK

8.32

-5.84

-5.05

KPPDLPIR

9.61

-4.23

-3.44

IPPPLPPK

9.68

-4.49

-3.70

P53971

PFLPSSLK

11.91

-4.08

-3.29

EKACPFLP

12.99

-4.64

-3.85

NPDPNPLD

13.07

-2.43

-1.64

Q12168

QHPVPKPN

9.55

-4.29

-3.50

DPYFPQFR

9.77

-7.08

-6.29

PPPLPPRA

10.69

-7.07

-6.28

P27472

PGSPRDLR

10.24

-5.41

-4.62

VPGSPRDL

14.34

-2.53

-1.74

P36006

PPPPPPMG

10.24

-5.65

-4.86

IPPPPPPM

10.90

-4.93

-4.14

PPPPPMGQ

12.28

-3.92

-3.13

P32790

PPPAMPAR

11.45

-3.66

-2.87

IKPPRPTS

12.06

-2.48

-1.69

PPIKPPRP

12.36

-5.96

-5.17

Q06440

TPKVEPSK

13.62

-1.37

-0.58

Q06412

PPPPPPLL

10.69

-5.43

-4.64

PPPPPLLY

10.89

-5.45

-4.66

PNSPKSPR

11.12

-3.78

-2.99

Q12216

QRNPYGPN

12.35

-2.16

-1.37

PKGSPTMD

13.36

-3.29

-2.50

NPYGPNYN

13.38

-3.40

-2.61

P34226

FVPVPPPQ

10.90

-5.17

-4.38

VPVPPPQL

11.09

-5.18

-4.39

PVPPPQLH

11.43

-5.65

-4.86

P36102

PRIYPPPH

11.07

-5.63

-4.84

PMQPPPIE

11.66

-4.33

-3.54

YPRIYPPP

13.29

-4.77

-3.98

P53933

PPPLPNRQ

9.62

-7.60

-6.81

RRPPPPPI

10.27

-4.46

-3.67

APPPLPNR

10.51

-4.78

-3.99

P40020

EPTSPTRQ

9.70

-6.62

-5.83

PPLTPEKN

10.71

-4.28

-3.49

VLPPLPFP

11.30

-6.54

-5.75

P53739

PQEPSPKI

11.39

-3.24

-2.45

RRSPSTPI

12.13

-2.51

-1.72

STPIMPSQ

12.65

-1.98

-1.19

Q12446

VPPPPPMR

6.41

-8.41

-7.62

APPPPPRR

6.86

-7.36

-6.57

APPPPPHR

8.10

-7.51

-6.72

P39969

VSPRRAPK

10.13

-4.53

-3.74

PPQPGSKK

10.22

-3.98

-3.19

PIPSPTRN

11.08

-6.31

-5.52

Q04195

PQNVPIRT

11.32

-5.92

-5.13

VLPTLPQN

11.46

-4.46

-3.67

VPNPPNTA

13.01

-4.05

-3.26

Q04439

APPPPGMQ

9.98

-5.16

-4.37

IPTPPQNR

10.05

-3.70

-2.91

PPSSKPKE

11.58

-2.98

-2.19

P40563

PSERPKRR

6.64

-10.18

-9.39

PPPVPKKP

9.90

-4.91

-4.12

RAPPPVPK

10.79

-3.69

-2.90

P40325

RPPPRPQQ

9.44

-3.82

-3.03

PRPPPRPQ

9.87

-4.86

-4.07

QPPRPPRP

10.40

-6.05

-5.26

P37370

MPKPRPFQ

8.46

-6.86

-6.07

PSINPPKQ

9.61

-4.85

-4.06

RPHMPSVR

9.90

-5.70

-4.91

Q07555

PASRPSLN

11.33

-4.68

-3.89

KTKVPKLP

11.53

-5.65

-4.86

VPKLPLPA

12.83

-4.44

-3.65

Q05080

PDKPRPIV

11.85

-3.01

-2.22

RQKPDKPR

11.98

-2.64

-1.85

QKPDKPRP

12.57

-3.02

-2.23

 


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