ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1ZUK2-12.PDB
Scoring matrix: BBC1_1ZUK2-12_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 15.54
Foldx random average score for Saccharomyces cerevisiae: 12.948

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 1199998
Proteins after disorder filtering: 4495
 Total fragments: 69666
Proteins after pattern filtering: 2116
 Total fragments: 11497
Proteins after MINT filtering: 32
 Total fragments: 583

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

15.54

-0.96

0.00

Best peptides

RWFRRWKK

0.00

-6.17

-5.21

         
Interactors      
Q06604

KGPRMPSR

7.40

-5.08

-4.12

LPTRPNKA

8.56

-5.73

-4.77

PSPPAKRI

9.42

-4.62

-3.66

P24583

LPPQPRKH

9.44

-4.94

-3.98

PLPPQPRK

9.44

-4.41

-3.45

RANAPLPP

11.50

-3.73

-2.77

Q06625

LPPIPLPK

10.51

-4.29

-3.33

GIPGTPRD

10.71

-3.23

-2.27

PLPKDAPK

11.97

-2.77

-1.81

P19812

PRPRRIPP

6.56

-6.82

-5.86

PIFRPGNI

8.21

-6.17

-5.21

RPRRIPPT

9.80

-8.29

-7.33

P53182

RRNPGKPP

12.08

-4.58

-3.62

SRRNPGKP

12.37

-3.57

-2.61

P53169

PIMPTLPP

9.58

-5.34

-4.38

NSVPIMPT

9.96

-4.87

-3.91

IMPTLPPR

11.55

-3.33

-2.37

P39521

PHVPDRPP

9.62

-6.94

-5.98

DAQPKPKP

10.71

-3.69

-2.73

VPDRPPSQ

10.76

-4.51

-3.55

P47068

PLPRAPPV

8.47

-5.76

-4.80

PHVPSLTN

8.51

-5.37

-4.41

DKVPPHPV

9.25

-5.65

-4.69

Q12043

GRFPLQPL

9.99

-4.85

-3.89

AAPGRFPL

10.67

-3.27

-2.31

PSTSPQRS

10.87

-4.49

-3.53

P40453

PEPPSWKP

6.79

-5.01

-4.05

LRKRPPPP

8.24

-7.11

-6.15

EIPPPLPP

9.41

-3.64

-2.68

P53971

KACPFLPS

10.62

-3.94

-2.98

CHPGKCPP

11.59

-3.09

-2.13

CPFLPSSL

12.06

-2.79

-1.83

Q12168

PYFPQFRS

7.81

-6.54

-5.58

RGPPPLPP

9.54

-3.97

-3.01

VQHPVPKP

9.87

-4.66

-3.70

P27472

SVPGSPRD

10.36

-3.78

-2.82

LSVPGSPR

11.56

-3.81

-2.85

P36006

GQPKDPKF

9.54

-3.24

-2.28

PPMGQPKD

10.56

-4.59

-3.63

PIPPPPPP

11.08

-3.54

-2.58

P32790

KPPRPTST

9.04

-4.22

-3.26

PAMPARPT

10.07

-7.90

-6.94

PIKPPRPT

10.25

-6.69

-5.73

Q06440

RTPKVEPS

12.62

-2.11

-1.15

TPKVEPSK

12.74

-3.14

-2.18

Q06412

KERRPPPP

8.57

-6.70

-5.74

NSPKSPRD

9.69

-3.89

-2.93

KPPPPLST

10.01

-4.18

-3.22

Q12216

DLPPIPPV

11.86

-2.83

-1.87

RNPYGPNY

12.12

-2.52

-1.56

STPKGSPT

12.56

-2.59

-1.63

P34226

EDFVPVPP

11.03

-4.26

-3.30

PVPPPQLH

11.18

-3.48

-2.52

DFVPVPPP

11.31

-4.50

-3.54

P36102

KYPRIYPP

6.99

-5.61

-4.65

NVPPPMQP

10.13

-4.82

-3.86

FNAPIFTP

11.16

-2.90

-1.94

P53933

TRRRPPPP

8.54

-7.36

-6.40

DLPMELPH

9.79

-4.20

-3.24

VAPPPLPN

9.84

-3.88

-2.92

P40020

DRPPPLTP

9.02

-4.43

-3.47

SLPPYLSP

9.75

-4.23

-3.27

VNPHSIPF

10.98

-4.21

-3.25

P53739

PIMPSQNS

10.01

-5.24

-4.28

PASPPLSP

11.10

-3.68

-2.72

PQEPSPKI

11.40

-2.71

-1.75

Q12446

PPPPPHRH

8.74

-7.10

-6.14

RNNRPVPP

8.81

-5.96

-5.00

PPPPPMRT

9.24

-6.89

-5.93

P39969

SPRRAPKP

7.73

-7.68

-6.72

VSPRRAPK

7.78

-4.46

-3.50

RAPKPPSY

10.54

-2.76

-1.80

Q04195

PQNVPIRT

10.52

-4.06

-3.10

NEPIQFPF

11.18

-3.45

-2.49

NSVPNPPN

11.27

-4.28

-3.32

Q04439

SNARPSPP

10.16

-4.41

-3.45

PTPPQNRD

10.81

-3.50

-2.54

GSPSELPL

10.93

-3.06

-2.10

P40563

PSERPKRR

6.84

-7.37

-6.41

APPPVPKK

10.08

-3.78

-2.82

PPPVPKKP

10.38

-4.42

-3.46

P40325

QPPRPPRP

7.06

-8.30

-7.34

SQPRPPPR

7.52

-6.32

-5.36

PPPRPQQN

8.59

-7.27

-6.31

P37370

PKPRPFQN

7.19

-6.85

-5.89

PQNRPHMP

7.92

-4.37

-3.41

PHMPSVRP

8.55

-6.00

-5.04

Q07555

TKVPKLPL

9.21

-4.99

-4.03

PLPASRPS

11.26

-5.48

-4.52

VPKLPLPA

11.44

-4.79

-3.83

Q05080

QKPDKPRP

10.71

-2.95

-1.99

RQKPDKPR

10.92

-4.60

-3.64

LRQKPDKP

12.38

-2.92

-1.96

 


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