ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1TG0-4.PDB
Scoring matrix: BBC1_1TG0-4_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 19.61
Foldx random average score for Saccharomyces cerevisiae: 21.727

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7179
 Total fragments: 1454726
Proteins after disorder filtering: 4560
 Total fragments: 109596
Proteins after pattern filtering: 2290
 Total fragments: 18223
Proteins after MINT filtering: 32
 Total fragments: 767

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

19.61

0.91

0.00

Best peptides

RFRFRPRRRW

0.00

-6.49

-7.40

         
Interactors      
Q06604

RYSNIPSSKP

10.90

-7.49

-8.40

TMKNKPKPTP

12.06

-7.01

-7.92

RVKPAPPVSR

12.33

-8.58

-9.49

P24583

ANAPLPPQPR

12.49

-6.80

-7.71

NAPLPPQPRK

13.42

-3.18

-4.09

ERANAPLPPQ

15.28

-4.02

-4.93

Q06625

GVLTLPPIPL

14.13

-7.65

-8.56

TLPPIPLPKD

14.48

-5.13

-6.04

GIPGTPRDGA

15.18

-5.88

-6.79

P19812

PQNPPPILQF

15.61

-3.43

-4.34

PRRIPPTDED

16.12

-4.14

-5.05

DAPQNPPPIL

16.71

-2.66

-3.57

P53182

KSSRRNPGKP

13.37

-2.65

-3.56

SSRRNPGKPP

15.29

-5.26

-6.17

P53169

SVPIMPTLPP

14.76

-8.21

-9.12

IMPTLPPRPY

16.55

-5.64

-6.55

TANSVPIMPT

17.26

-4.68

-5.59

P39521

QTPHVPDRPP

10.95

-5.03

-5.94

HVPDRPPSQL

11.38

-8.06

-8.97

DAQPKPKPAQ

17.02

-2.27

-3.18

P47068

RAPPVPPATF

12.45

-6.30

-7.21

PLPRAPPVPP

12.80

-6.87

-7.78

TAPPLPRAPP

13.63

-5.18

-6.09

Q12043

RFPLQPLPSP

10.82

-9.71

-10.62

NTLFNPSRFP

12.99

-4.96

-5.87

FNPSRFPMDA

14.28

-2.39

-3.30

P40453

RLRKRPPPPP

6.33

-12.80

-13.71

RKRPPPPPPV

10.05

-7.88

-8.79

LRKRPPPPPP

12.43

-12.52

-13.43

P53971

QRKCHPGKCP

10.30

-7.38

-8.29

RKCHPGKCPP

11.88

-8.81

-9.72

GKVVNPDPNP

12.24

-7.06

-7.97

Q12168

NKVQHPVPKP

11.42

-5.80

-6.71

NRGPPPLPPR

12.49

-6.55

-7.46

TNRGPPPLPP

13.54

-6.77

-7.68

P27472

SVPGSPRDLR

14.01

-7.23

-8.14

PLSVPGSPRD

16.94

-3.20

-4.11

RPLSVPGSPR

17.48

-6.01

-6.92

P36006

ANIPIPPPPP

11.88

-7.58

-8.49

NIPIPPPPPP

12.29

-5.62

-6.53

KKPKNPGGLS

14.27

-3.89

-4.80

P32790

SSAPAPLDPF

16.20

-3.74

-4.65

GGTTVPAAPV

18.06

-3.26

-4.17

TVPAAPVSSA

18.39

-3.66

-4.57

Q06440

KKDRTPKVEP

12.40

-6.14

-7.05

Q06412

RRPPPPPPLL

10.87

-8.26

-9.17

VKERRPPPPP

11.39

-6.82

-7.73

FFTKPPPPLS

11.93

-6.07

-6.98

Q12216

FYNRGPSTPL

12.57

-6.66

-7.57

RNPYGPNYNT

14.32

-5.10

-6.01

NHTSTPKGSP

14.96

-4.49

-5.40

P34226

FVPVPPPQLH

12.15

-8.12

-9.03

DFVPVPPPQL

15.31

-4.64

-5.55

SLGSTPTNSP

16.28

-5.10

-6.01

P36102

KYPRIYPPPH

12.04

-3.31

-4.22

ANNVPPPMQP

13.41

-7.01

-7.92

SNLKYPRIYP

13.98

-5.75

-6.66

P53933

RTRRRPPPPP

7.99

-9.48

-10.39

RRRPPPPPIP

9.23

-9.35

-10.26

TRRRPPPPPI

11.09

-7.18

-8.09

P40020

RNCVNPHSIP

11.61

-9.42

-10.33

SFDRPPPLTP

13.30

-7.62

-8.53

KSRVLPPLPF

13.69

-5.80

-6.71

P53739

FFPQEPSPKI

11.36

-6.24

-7.15

GRRRSPSTPI

13.12

-8.81

-9.72

RRRSPSTPIM

13.82

-5.77

-6.68

Q12446

RRGPAPPPPP

9.25

-12.05

-12.96

RLPAPPPPPR

9.38

-8.87

-9.78

NRNNRPVPPP

10.97

-6.44

-7.35

P39969

RRAPKPPSYP

9.78

-9.77

-10.68

ARSSSPEENP

12.67

-5.94

-6.85

ALSPIPSPTR

13.27

-5.49

-6.40

Q04195

RQNSTPVLPT

13.64

-6.20

-7.11

CSSSHPSEPI

14.87

-3.54

-4.45

SRGNEPIQFP

15.63

-6.69

-7.60

Q04439

RHSKKPAPPP

9.39

-7.95

-8.86

RQANIPPPPP

10.27

-8.15

-9.06

QANIPPPPPP

11.69

-6.70

-7.61

P40563

RRAPPPVPKK

10.08

-9.42

-10.33

KRRAPPPVPK

11.52

-6.30

-7.21

PKRRAPPPVP

12.53

-6.94

-7.85

P40325

GHQSRPHQRP

10.04

-7.40

-8.31

SSQPRPPPRP

11.45

-5.85

-6.76

SQPPRPPRPA

12.02

-5.74

-6.65

P37370

NRPHMPSVRP

9.98

-5.30

-6.21

SMPAPPPPPP

12.51

-7.43

-8.34

GHVPPPPVPP

13.08

-8.16

-9.07

Q07555

WKTKVPKLPL

11.05

-4.87

-5.78

PKLPLPASRP

12.51

-4.46

-5.37

KVPKLPLPAS

14.89

-5.33

-6.24

Q05080

QKPDKPRPIV

9.74

-5.90

-6.81

LRQKPDKPRP

14.90

-4.21

-5.12

RQKPDKPRPI

15.34

-4.61

-5.52

 


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