ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1TG0-11.PDB
Scoring matrix: BBC1_1TG0-11_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 13.45
Foldx random average score for Saccharomyces cerevisiae: 11.460

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3221900
Proteins after random average filtering: 7179
 Total fragments: 1256374
Proteins after disorder filtering: 4655
 Total fragments: 87612
Proteins after pattern filtering: 2254
 Total fragments: 12892
Proteins after MINT filtering: 32
 Total fragments: 686

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAA

13.45

0.62

0.00

Best peptides

WRWRRRR

0.00

-1.99

-2.61

         
Interactors      
Q06604

GPRMPSR

5.52

-5.77

-6.39

LPTRPNK

6.07

-5.82

-6.44

KPLLPTR

6.49

-5.93

-6.55

P24583

LPPQPRK

6.78

-6.04

-6.66

PPQPRKH

7.82

-4.30

-4.92

PLPPQPR

8.43

-4.45

-5.07

Q06625

LPPIPLP

7.01

-6.21

-6.83

IPGTPRD

9.13

-4.52

-5.14

PPIPLPK

9.62

-4.36

-4.98

P19812

PRPRRIP

5.26

-3.60

-4.22

PRRIPPT

7.18

-5.65

-6.27

SPIFRPG

8.38

-1.80

-2.42

P53182

RRNPGKP

9.40

-2.85

-3.47

RNPGKPP

10.16

-2.71

-3.33

P53169

MPTLPPR

5.45

-7.13

-7.75

VPIMPTL

7.74

-4.97

-5.59

TLPPRPY

8.34

-2.65

-3.27

P39521

TPHVPDR

6.35

-5.50

-6.12

PKPKPAQ

7.47

-3.57

-4.19

VPDRPPS

7.48

-3.97

-4.59

P47068

IPPVPPT

7.41

-5.95

-6.57

APSIPPV

7.60

-5.79

-6.41

PPLPRAP

7.65

-3.70

-4.32

Q12043

NPSRFPM

6.91

-4.66

-5.28

FPSTPLF

7.85

-6.15

-6.77

APGRFPL

8.03

-3.52

-4.14

P40453

RPPPPPP

6.86

-6.65

-7.27

KRPPPPP

7.04

-4.90

-5.52

RKRPPPP

7.29

-5.21

-5.83

P53971

NPDPNPL

8.16

-2.11

-2.73

HPGKCPP

8.66

-4.28

-4.90

NPLDPNS

10.05

-2.59

-3.21

Q12168

PPPVPNR

5.04

-7.35

-7.97

PPPLPPR

6.37

-6.74

-7.36

VPNRPGG

7.73

-5.94

-6.56

P27472

RPLSVPG

9.82

-2.70

-3.32

PLSVPGS

9.85

-4.88

-5.50

VPGSPRD

10.01

-2.52

-3.14

P36006

NIPIPPP

6.60

-5.32

-5.94

KKPKNPG

6.63

-4.26

-4.88

IPPPPPP

7.68

-5.83

-6.45

P32790

PPIKPPR

4.17

-7.02

-7.64

PPAMPAR

4.80

-6.51

-7.13

MPARPTA

6.58

-5.97

-6.59

Q06440

PKVEPSK

8.20

-2.46

-3.08

RTPKVEP

10.15

-2.40

-3.02

Q06412

RRPPPPP

6.46

-4.26

-4.88

RPPPPPP

6.86

-6.65

-7.27

NSPKSPR

7.23

-1.52

-2.14

Q12216

LPPIPPV

7.04

-6.08

-6.70

NPYGPNY

8.91

-2.92

-3.54

PKGSPTM

9.89

-1.42

-2.04

P34226

FVPVPPP

8.22

-6.52

-7.14

VPVPPPQ

9.20

-4.41

-5.03

PVPPPQL

9.57

-3.65

-4.27

P36102

PPPMQPP

8.14

-4.78

-5.40

PRIYPPP

8.28

-3.68

-4.30

PPMQPPP

8.75

-6.02

-6.64

P53933

RRPPPPP

6.46

-4.26

-4.88

RRRPPPP

6.59

-4.27

-4.89

PPPLPNR

6.87

-6.16

-6.78

P40020

EPTSPTR

6.79

-4.08

-4.70

RVLPPLP

8.67

-3.99

-4.61

APSIPVE

8.74

-4.05

-4.67

P53739

TPIMPSQ

8.45

-4.58

-5.20

SPASPPL

9.23

-3.21

-3.83

PPLSPTI

9.61

-3.81

-4.43

Q12446

PPPRRGP

5.27

-5.93

-6.55

PPPPPRR

5.45

-6.93

-7.55

PPPPPHR

5.59

-6.20

-6.82

P39969

SPRRAPK

7.10

-3.65

-4.27

VSPRRAP

7.24

-1.88

-2.50

PIPSPTR

7.37

-4.18

-4.80

Q04195

PQNVPIR

7.35

-5.01

-5.63

EPIQFPF

8.24

-4.39

-5.01

NEPIQFP

8.76

-1.92

-2.54

Q04439

KPKEPMF

7.07

-4.97

-5.59

IPPPPPP

7.68

-5.83

-6.45

KPAPPPP

7.81

-5.41

-6.03

P40563

PPPVPKK

5.97

-7.38

-8.00

PSERPKR

6.33

-4.41

-5.03

TPNVPTR

6.47

-5.26

-5.88

P40325

QPPRPPR

4.19

-6.88

-7.50

RPPRPAA

5.79

-5.50

-6.12

RPPPRPQ

6.07

-4.10

-4.72

P37370

MPKPRPF

4.51

-5.57

-6.19

MPSVRPA

5.48

-5.48

-6.10

RPHMPSV

6.47

-5.74

-6.36

Q07555

LPASRPS

8.20

-2.62

-3.24

PASRPSL

8.60

-2.89

-3.51

KVPKLPL

8.70

-3.44

-4.06

Q05080

KPDKPRP

5.73

-5.78

-6.40

QKPDKPR

8.20

-0.43

-1.05

PDKPRPI

9.11

-1.62

-2.24

 


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