ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BBC1_1FYN-7.PDB
Scoring matrix: BBC1_1FYN-7_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAA
Foldx wt ligand score: 9.53
Foldx random average score for Saccharomyces cerevisiae: 10.310

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 1620808
Proteins after disorder filtering: 4856
 Total fragments: 146639
Proteins after pattern filtering: 2340
 Total fragments: 20933
Proteins after MINT filtering: 32
 Total fragments: 956

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AGAAAAAA

9.53

-2.57

0.00

Best peptides

WRRFPPPH

0.00

-3.91

-1.34

         
Interactors      
Q06604

KPTPPSPP

4.29

-6.32

-3.75

KPAPPVSR

4.52

-5.73

-3.16

KPKPTPPS

4.71

-4.46

-1.89

P24583

APLPPQPR

5.76

-6.15

-3.58

PPQPRKHD

6.36

-4.53

-1.96

ANAPLPPQ

7.16

-3.50

-0.93

Q06625

TLPPIPLP

5.34

-5.73

-3.16

IPGTPRDG

6.19

-5.97

-3.40

IPLPKDAP

6.57

-3.60

-1.03

P19812

PQNPPPIL

4.95

-5.99

-3.42

APQNPPPI

5.34

-5.14

-2.57

EPRPRRIP

5.86

-5.39

-2.82

P53182

RRNPGKPP

9.67

-3.46

-0.89

SRRNPGKP

9.80

-5.00

-2.43

P53169

IMPTLPPR

5.75

-4.08

-1.51

PTLPPRPY

6.12

-6.09

-3.52

NSVPIMPT

6.52

-4.16

-1.59

P39521

QPKPKPAQ

4.56

-3.57

-1.00

QTPHVPDR

5.83

-4.42

-1.85

VPDRPPSQ

6.34

-6.42

-3.85

P47068

VMPFVDPS

3.57

-6.08

-3.51

VPPHPVPS

3.65

-6.09

-3.52

PPAPPAPL

4.11

-5.70

-3.13

Q12043

FPSTPLFE

5.29

-6.70

-4.13

PSRFPMDA

5.35

-5.22

-2.65

FNPSRFPM

5.90

-2.85

-0.28

P40453

KRPPPPPP

2.32

-6.62

-4.05

PPPPPVSM

4.61

-5.21

-2.64

KVPEPPSW

4.66

-4.86

-2.29

P53971

KACPFLPS

5.78

-2.25

0.32

VNPDPNPL

5.83

-4.44

-1.87

EKACPFLP

6.11

-5.41

-2.84

Q12168

NRGPPPLP

4.65

-5.72

-3.15

PPLPPRAN

4.97

-5.56

-2.99

PPVPNRPG

5.42

-4.91

-2.34

P27472

VPGSPRDL

6.22

-4.45

-1.88

PGSPRDLR

6.58

-4.92

-2.35

PLSVPGSP

7.85

-4.72

-2.15

P36006

IPPPPPPM

2.75

-4.72

-2.15

IPIPPPPP

4.11

-8.09

-5.52

KPKNPGGL

4.71

-5.32

-2.75

P32790

IKPPRPTS

4.61

-1.82

0.75

PIKPPRPT

4.68

-5.64

-3.07

VPAAPVSS

5.66

-4.80

-2.23

Q06440

DRTPKVEP

8.59

-1.42

1.15

TPKVEPSK

10.02

-3.11

-0.54

Q06412

PPPPPPLL

3.20

-7.34

-4.77

ERRPPPPP

3.24

-6.90

-4.33

FTKPPPPL

3.29

-6.27

-3.70

Q12216

QRNPYGPN

4.52

-1.75

0.82

DLPPIPPV

4.58

-5.13

-2.56

PIPPVDPN

5.49

-4.02

-1.45

P34226

PVPPPQLH

4.22

-6.92

-4.35

FVPVPPPQ

5.69

-5.82

-3.25

PTNSPSPG

6.55

-4.30

-1.73

P36102

PRIYPPPH

2.29

-6.99

-4.42

YDPFNAPI

4.56

-2.80

-0.23

PMQPPPIE

4.60

-7.27

-4.70

P53933

VAPPPLPN

4.02

-5.84

-3.27

PPPPPIPS

4.18

-5.60

-3.03

PPPPIPST

4.95

-5.07

-2.50

P40020

MSLPVTPV

4.73

-4.71

-2.14

DRPPPLTP

5.24

-3.29

-0.72

VLPPLPFP

5.59

-6.86

-4.29

P53739

FPQEPSPK

5.57

-4.94

-2.37

PSTPIMPS

5.82

-4.70

-2.13

SPASPPLS

6.42

-5.01

-2.44

Q12446

PAPPPPPH

3.42

-6.69

-4.12

VAPPPPPA

3.61

-6.86

-4.29

PPPPPAFL

3.84

-7.77

-5.20

P39969

KLLPPQPG

3.63

-5.73

-3.16

PPSYPSPA

4.25

-5.43

-2.86

PRRAPKPP

4.57

-6.03

-3.46

Q04195

VPNPPNTA

4.78

-5.91

-3.34

QNSTPVLP

6.07

-5.63

-3.06

PSEPIIIN

6.08

-5.56

-2.99

Q04439

KPAPPPPG

2.85

-6.97

-4.40

IPPPPPPP

3.60

-5.44

-2.87

PPPPPPPS

3.60

-6.49

-3.92

P40563

PPVPKKPS

5.34

-3.87

-1.30

NSEPPTPA

5.67

-4.55

-1.98

EPPTPAGT

6.26

-5.08

-2.51

P40325

PRPPPRPQ

3.08

-5.75

-3.18

PPRPPRPA

3.74

-6.54

-3.97

PRPPRPAA

4.07

-3.39

-0.82

P37370

KSPPPPPS

3.07

-6.10

-3.53

PPPPPPPA

3.40

-6.65

-4.08

PPPPPPPG

3.40

-6.76

-4.19

Q07555

TKVPKLPL

5.78

-2.21

0.36

KTKVPKLP

6.61

-6.95

-4.38

PLPASRPS

6.68

-2.76

-0.19

Q05080

PDKPRPIV

5.29

-4.85

-2.28

KPDKPRPI

6.69

-6.77

-4.20

QKPDKPRP

10.20

-3.97

-1.40

 


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