ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: ABP1_1JO8-29.PDB
Scoring matrix: ABP1_1JO8-29_mat
Uniprot code: P15891
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 22.06
Foldx random average score for Saccharomyces cerevisiae: 16.275

Available information for P15891 in MINT (Nov 2008):
Nš of interacting proteins: 39
 Proteins belonging to other specie: 0
Nš of interactions described: 88
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7178
 Total fragments: 1369547
Proteins after disorder filtering: 3993
 Total fragments: 52081
Proteins after pattern filtering: 2008
 Total fragments: 11977
Proteins after MINT filtering: 34
 Total fragments: 435

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

22.06

-2.65

0.00

Best peptides

HYPPRRKRRR

0.00

-12.72

-10.07

         
Interactors      
P09119

TPTTSPVKKS

12.44

-6.87

-4.22

LTPTTSPVKK

13.21

-8.31

-5.66

PLTPTTSPVK

16.14

-5.30

-2.65

P43603

GRFTAPTSPS

16.05

-7.53

-4.88

P53145

PLPGQPPLIN

11.23

-9.52

-6.87

LLPPLPGQPP

12.66

-9.28

-6.63

NEPLLPPLPG

13.74

-8.30

-5.65

Q08957

ILPSTPTRPL

8.78

-11.02

-8.37

CILPSTPTRP

14.66

-5.98

-3.33

P16649

HSKPIPPFLL

10.20

-11.24

-8.59

SKPIPPFLLD

12.92

-9.45

-6.80

ANHSKPIPPF

14.35

-6.24

-3.59

P48562

PYRPHHNMIN

10.72

-6.98

-4.33

PLNPYRPHHN

10.89

-7.64

-4.99

PKPPISAPRA

11.23

-9.61

-6.96

P40341

PPPPPPPKPP

12.87

-8.80

-6.15

NIPPPPPPPP

13.67

-8.50

-5.85

PPPPKPPLND

13.78

-8.38

-5.73

P17555

GPPPRPKKPS

8.48

-14.18

-11.53

SGPPPRPKKP

10.45

-8.83

-6.18

SKSGPPPRPK

11.72

-9.33

-6.68

P40494

SRPPRPPPKP

9.16

-13.61

-10.96

KDKSRPPRPP

9.59

-14.37

-11.72

GKDKSRPPRP

11.33

-6.11

-3.46

P37298

VLPQKPGGVR

14.69

-8.52

-5.87

P04050

PVPPPPVRPS

10.38

-12.34

-9.69

PPPVRPSISF

12.38

-10.79

-8.14

SYSPTSPNYS

12.46

-5.53

-2.88

P40325

SQPPRPPRPA

6.51

-12.31

-9.66

SQPRPPPRPQ

9.84

-11.10

-8.45

GHQSRPHQRP

9.86

-11.03

-8.38

P40095

LPPPRSPNRP

9.11

-11.91

-9.26

RIPVLPPPRS

10.22

-8.92

-6.27

PPPRSPNRPT

11.31

-11.22

-8.57

Q12168

IPPPVPNRPG

10.17

-10.65

-8.00

DDPYFPQFRS

10.17

-9.00

-6.35

GPPPLPPRAN

11.63

-9.87

-7.22

P08458

NLPKRKPPKL

9.32

-14.16

-11.51

LPKRKPPKLQ

10.85

-9.67

-7.02

VMTNLPKRKP

10.88

-9.82

-7.17

Q06449

NYYQQPQQQP

14.11

-6.10

-3.45

QQPQQQPQQA

14.16

-8.16

-5.51

SYQQQPFPPP

14.25

-6.09

-3.44

P32793

HGPTHPSNMS

13.24

-9.43

-6.78

SLGHGPTHPS

14.89

-8.06

-5.41

GHGPTHPSNM

16.27

-4.45

-1.80

P32790

LPPIKPPRPT

9.28

-10.76

-8.11

PPPAMPARPT

9.72

-10.76

-8.11

IKPPRPTSTT

13.59

-10.78

-8.13

Q06337

PNPTQPRKPL

11.07

-9.84

-7.19

RPNPTQPRKP

11.35

-8.34

-5.69

ASLPISPRPP

11.62

-9.58

-6.93

Q01389

RYPQTPSYYY

10.04

-7.78

-5.13

TEPSTPSRPV

10.46

-9.50

-6.85

SPSYPSIFRR

12.00

-6.81

-4.16

P22082

GRPRGRPKKV

8.30

-9.33

-6.68

RPRGRPKKVK

9.98

-12.51

-9.86

NNPPKPQKPV

10.21

-8.96

-6.31

P53974

TPPPKPSHLK

9.84

-11.33

-8.68

LKPKPPPKPL

11.25

-9.88

-7.23

KPPPKPLLLA

11.29

-9.60

-6.95

Q06836

PMGSRGPLLP

14.99

-9.19

-6.54

KPPLSPSSFI

15.65

-6.26

-3.61

NKPPLSPSSF

15.82

-5.52

-2.87

Q05580

QLPPPKPKVQ

12.33

-7.87

-5.22

NLPQLPPPKP

13.06

-9.43

-6.78

LPQLPPPKPK

13.18

-7.01

-4.36

P53933

VRTRRRPPPP

10.57

-12.18

-9.53

RRPPPPPIPS

11.18

-10.41

-7.76

APPPLPNRQL

11.48

-10.30

-7.65

Q04439

NIPTPPQNRD

10.63

-9.87

-7.22

NNIPTPPQNR

12.82

-8.39

-5.74

PPPPPSSKPK

13.01

-7.38

-4.73

Q08873

PRPPVKSKPK

9.33

-11.19

-8.54

TKKPRPPVKS

9.75

-11.99

-9.34

QLSTKKPRPP

11.27

-9.40

-6.75

P38885

AAPPSPENSH

14.58

-7.46

-4.81

P50942

PRPCPPIRRK

7.46

-11.62

-8.97

VPRPCPPIRR

10.23

-8.91

-6.26

PCPPIRRKSS

10.44

-8.99

-6.34

P48415

PPPPIVKRKD

9.23

-11.42

-8.77

PPPPPIVKRK

10.42

-8.64

-5.99

GGPKTKPRSG

12.02

-8.89

-6.24

P40563

APPPVPKKPS

10.28

-9.77

-7.12

RAPPPVPKKP

12.57

-8.31

-5.66

KRRAPPPVPK

13.06

-9.78

-7.13

P38822

APEVPPPRRS

10.32

-8.57

-5.92

PAPEVPPPRR

11.35

-8.92

-6.27

Q12134

THQPVPSPMN

13.48

-7.46

-4.81

HQPVPSPMNS

13.80

-6.70

-4.05

QPVPSPMNSQ

16.23

-6.55

-3.90

P47976

PSPWLPSKPN

12.69

-9.39

-6.74

WLPSKPNCYH

12.76

-8.87

-6.22

EYSPRPSPWL

12.78

-7.05

-4.40

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER